Thermofilum pendens: Tpen_1518
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Entry
Tpen_1518 CDS
T00446
Name
(GenBank) phosphoesterase, DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tpe
Thermofilum pendens
Pathway
tpe03410
Base excision repair
tpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tpen_1518
03430 Mismatch repair
Tpen_1518
03440 Homologous recombination
Tpen_1518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpe03400
]
Tpen_1518
DNA repair and recombination proteins [BR:
tpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Tpen_1518
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tpen_1518
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Tpen_1518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Glyco_trans_4_5
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
ABL78915
UniProt:
A1S0D5
LinkDB
All DBs
Position
complement(1465511..1466449)
Genome browser
AA seq
312 aa
AA seq
DB search
MAGVILAHGDSDGVTAAAIAKSVYRDAEVFFTHPVGLAKDLEEFARGRSPVIILDVAVDE
AGAPRLAEVLRSLGAEVVYVDHHPGGEALEKIRVPGVRVVHEEGPCAAELAYRFFKPPRE
MSRVALYGAIGDHALGTAWVAEALEEWDLKTLFFDAGVLVLALEALGRDYESKRRVVDLL
AGGGVPSREKSLVELAARQSLLNEELRVRVREKALVVGQVAYVMDPGGSLGTAAFYARVE
RGVKVGVAVERRGETCVMSLRSTGGVDLNALLRRIAPRHGGHGGGHRQAAGARIPCGELE
KFLAELAASLDR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggcgttatacttgcgcacggcgactccgacggcgtgacggcggccgccatagcg
aagagcgtttacagggacgcagaggtcttcttcacgcacccggtggggctcgcgaaggac
ctggaggagttcgcccggggcaggagccccgtgatcatactcgacgtcgccgtcgacgag
gccggcgcgccgaggctagcggaggttctccgctcgctgggcgcagaggtcgtctacgta
gaccaccacccgggtggagaggcgctggagaagatacgcgtacccggcgtgagggtcgtc
cacgaggaggggccctgcgcggcggagcttgcctacaggttcttcaagcctcccagagag
atgagcagggtggcgctctacggcgctataggcgaccacgccctgggaaccgcgtgggtc
gcggaggctctcgaggagtgggacttgaagacgctcttcttcgacgccggcgtgctcgtg
ctggctctcgaggctctggggagggactacgagtcgaagaggagggtcgtggacctcctg
gcgggcggcggcgtgccgtcgcgggagaagagcctcgtagagctcgcggcgaggcagagc
ctgctcaacgaggagctcagggtcagggttcgtgagaaggctctggtcgttgggcaggta
gcctacgtcatggaccctggcgggagcctgggcaccgcggccttctacgcgagggtggag
agaggcgtgaaggtaggcgtagccgtagagcgcagaggggaaacgtgcgtgatgagcctt
aggtctaccggcggagtggacctcaacgccctgctgagaaggatagccccgaggcacggt
gggcacgggggaggacacagacaggcggccggcgccaggatcccgtgcggcgagctcgag
aagttcttggcggagcttgcggccagcctcgaccgttaa
DBGET
integrated database retrieval system
