Trueperella pecoris: HLG82_00125
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Entry
HLG82_00125 CDS
T07390
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpec
Trueperella pecoris
Brite
KEGG Orthology (KO) [BR:
tpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpec03032
]
HLG82_00125 (topA)
03400 DNA repair and recombination proteins [BR:
tpec03400
]
HLG82_00125 (topA)
Enzymes [BR:
tpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HLG82_00125 (topA)
DNA replication proteins [BR:
tpec03032
]
Prokaryotic type
DNA Topoisomerases
HLG82_00125 (topA)
DNA repair and recombination proteins [BR:
tpec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HLG82_00125 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QOQ38007
LinkDB
All DBs
Position
23159..25888
Genome browser
AA seq
909 aa
AA seq
DB search
MTKLVIVESPAKARTIGNYLGSDYVVEASIGHIRDLPRPSELPAEMKKGPFSKFAVDVEN
GFDPYYVVNPDKKKKVAELKKALKDADALYLATDEDREGEAIAWHLLEALKPKVPVKRMV
FHEITKEAIARALENTRDIDAELVDAQETRRILDRLVGYEVSPLLWRKVAPGLSAGRVQS
VTTRLVVERERERMAFVPASYWDVSVHHVKGEEGFDSKLYSLDGARIASGKDYGDDGELT
PKSVKAGVRTLDSAQATAVAEALEKAESWVSSVETKPYRRRPAAPFTTSTLQQEASRKLH
LSSRDTMRVAQSLYENGFITYMRTDSTNLSSEAIAAARKQIKELYGSASLPDKPRLYASK
AKGAQEAHEAIRPAGDSFRTPQQVANQLRGREFQLYELIWKRTVASQMADATGSTASVRL
VADIKGAADAQEAVMSASGTIITFRGFLAAYEEGTDTKRYEDKESDSRLPDLAEGEMVDN
ASAKADGHETTPPPRYTEASLVRTLEERGIGRPSTYASTISTVIDRGYVDKKGSALVPTW
TAFSVVRLLEDNLPELVDYDFTADMESDLDDIAAGKKGRVDYLQGFYYGSGENSGLHGQV
DGLGDIDARAVNTIDLSEAVAVRVGRYGPYLEETDQAGTVLRRGNIPPEVTPDEMTLAKA
KEILDSAMQEDRELGKDPETGYSIVVKDGRFGPYVSEVLPDDAVAYTPTGKVSKVKPKPR
TASLFASMSPDTVTIDDALKLLSLPREVGESDGEMIVATNGRFGPYMKRGSDSRSLESEE
QIFAITLEEAEAIFAQPKVRGQRQARPPLAELGKDPVSGGNILLKDGRFGPYVTDGETNA
SLPRSEDINQITPERAQELLVQRRLKIAEQGGPKARNKTAKTVRGRNTTAKKTTAKKAPA
KKTAKPADK
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcttgtcatcgtcgagtctccggctaaagcgcgcacgatcgggaactatctg
gggtccgattacgtggtggaggcgtcgattggccatattcgtgatctcccgcgcccatcc
gagctgcctgccgagatgaagaagggcccattttccaaattcgctgtggatgtggaaaac
ggcttcgatccctactacgtggtcaacccggacaagaaaaagaaggtcgcggagctgaag
aaggccctcaaggacgccgatgccctctatctggcaactgatgaggaccgcgagggtgag
gcaatcgcctggcaccttctcgaagcgttgaagccgaaggtgccggttaagcgcatggtc
tttcacgagattacgaaggaagcgatcgcccgcgcgctggaaaatactcgcgatatcgac
gcggaattggtggacgcccaggaaacccgccgcatcctggatcgcctcgtgggctatgag
gtgtccccgctgctgtggcgcaaggtggccccgggcttgtccgcgggccgtgtgcagtcc
gtgaccacccgccttgtggtggagcgtgagcgtgagcgcatggcattcgtgcccgcctcg
tattgggacgtgtcggtccaccacgtcaagggcgaggagggctttgactccaagctgtat
tcgcttgacggcgctcgcatcgcctcgggtaaggactatggtgacgacggcgaattgacg
cccaagtccgtcaaggccggtgttcgtacgctcgattcggcgcaggccacggcggtggcc
gaggccctggagaaggcggagtcgtgggtgtcttcggtggaaaccaagccctaccggcgc
cgtcccgcggctccgtttaccacctcgacgctccagcaggaggcatcccgcaaactccac
ctgtcctcgcgggacacgatgcgagttgcccagtccctgtacgagaacggtttcatcacc
tacatgcgaaccgattccacgaacctctcgagcgaggcgatcgcggcggcccgcaagcag
atcaaggaactgtatggttcggcgtcgttaccggacaagccgcgcttgtatgcgtcgaag
gcgaagggtgcccaggaggctcacgaggcgatccgtcccgcaggcgattccttccgtacc
ccgcagcaggtggccaaccagttgcgtgggcgtgaattccagctgtacgaactgatttgg
aagcgcacggtcgcctcgcagatggcggacgccacgggctccacagcctcggtcaggctc
gtcgctgatatcaagggtgcggcggatgcgcaggaggcggtgatgtcggcgtcgggaacg
atcatcacgttccgcggattcctagccgcctacgaagagggcacggacacgaagcgttac
gaggacaaggaatcggactcgcgcctgccggatctggccgagggtgagatggtggacaac
gcctcggcgaaggccgacggccacgaaaccacgccgccgccgcgttacacggaagcgtcg
ctcgtgcgcacgctcgaggagcgcgggatcggccgcccgtccacgtatgcctccacgatt
tctacggttattgatcgcggctatgtggataagaagggctcggcgctcgtccccacatgg
acggcgttttcggtggtgcgccttcttgaggacaacctgcctgagcttgtcgactatgac
ttcacggcggacatggaatccgatctggacgatatcgccgcaggtaagaaggggcgagtc
gactacctccagggcttctactacggaagcggggagaactcgggcctgcacgggcaggtt
gacgggctcggcgacatcgatgcgcgtgcggtcaacacgatcgacctgtcggaggcggtc
gccgtgcgtgtgggacgctacgggccctacctcgaagagaccgatcaggccggaaccgtg
ctccggcgcggcaacattcctccggaggtgaccccggatgagatgacgttggccaaggcc
aaggaaatcctggactcggccatgcaggaggaccgcgagctgggcaaggatccggagacc
ggctactcgatcgtggtcaaagatgggcgctttggaccttacgtgtctgaggttcttccg
gacgacgccgtcgcctacactcccaccggaaaggtgtcgaaggtcaagcccaagccacgt
acggcctcgcttttcgcgtcgatgagcccggatacggtgacgatcgatgacgccctgaag
ctgctctcgctgccgcgtgaggtgggcgagtcggacggggagatgatcgtcgcgacgaac
ggtaggttcggcccctacatgaagcgcggctcggattcgcgttcgctcgagtctgaggag
cagattttcgcgatcacgctcgaggaggccgaggcgatcttcgcccagccgaaggtgcgt
ggtcagcgtcaagcccggccgccgttggcggagctgggcaaggatccggtctcgggtggg
aatatcctgctcaaggatgggcgcttcggcccgtacgtcaccgatggtgagacgaacgcg
tcgttgccgcgctcggaggacatcaatcagatcacgcccgagcgtgcgcaggagctgctg
gttcagcggcgcttgaagatcgccgagcagggcggcccgaaggcgcgtaacaagacggcg
aagacggttcgtgggcggaatacgacggccaagaagacgacggcaaagaaagccccggcg
aagaagacggctaagccggcagacaagtag
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