Trueperella pecoris: HLG82_04845
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Entry
HLG82_04845 CDS
T07390
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
tpec
Trueperella pecoris
Brite
KEGG Orthology (KO) [BR:
tpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpec03019
]
HLG82_04845
Enzymes [BR:
tpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HLG82_04845
Messenger RNA biogenesis [BR:
tpec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HLG82_04845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DSHCT
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
MTR4-like_stalk
AAA_30
AAA_16
AAA_19
nSTAND3
FAM81B
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QOQ38837
LinkDB
All DBs
Position
complement(1005597..1008260)
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AA seq
887 aa
AA seq
DB search
MPRASHGPGSARCVEAGDVMDLVANNFVDRYAGRGIYLDNFQLEAIEALGQDRDVLVSAP
TGAGKTVVAEYAVELALARMQKCIYTAPIKALSNQKYRDLAERLGVENVGLLTGDQAINR
EASILVVTTEVLRNMLFQHDDVVGDVGYVVLDEVHYLADEFRGPVWEEVILQLPAHVRLV
SLSATISNVEEFAAWLRSIRGVTTVVVSQVRPVPLVQHVAIQRRIEPLYDNGELNARLVQ
TAGSRGRSRRRTGLARRKGVLTQLTSRDLLPAIEFIFSRKGCDRAVSDLLDDGLTLTTPA
EQRLIRAHLRALRQELTEEDQRAVRFAFWSRAMVRGFAAHHAGMFPALKELAEDLMEAGL
LKLVYATGTLALGIDMPVRTVVLEELQRWNGSDFVDLTATEYTQLIGRAGRRGKDKVGHA
VVLHSDELDLGALANLGSGRVEPLYSAFFPSYNSVVNLLAFHSYEDARAIMGTSFAQYQR
NAELGDLRGRIARIRARLEVLEAELENSCLLGDVAEYLRIRRRSERASKAERKRAKQEYR
SRMERSWDEARTGRLYAFARQGELEYGVTLSVGRKLRLVNLYGEMVWLHEDELSSELRDL
GTNDMPFGLSPKDPQVRQTIAESIWEAIEERSALGTDADLTSSWDRFAVRSSAELEAHPV
HHCPDLGDHLRHGTEYVSLLNNLESLETTSERYDDSVAKEFDATASVLSRLGYLQPGESG
ESAAGHVKLAAGAAMLRGIHNEADLLIVQCLNEAAIQGLTPAEFAGVTSAFLCDRRLGTA
LPRQATLRAAWTAIERNLDFLRALEAAVDITRTSDPFPGAMEAFAAWASGADLETVMQMS
DLVVGDFISANRRLIDLLGQIEQVAPAGPLHECAGRARDMIRRWEWL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgccagccacggtccgggttctgcccggtgcgttgaggctggtgatgtaatg
gatctcgtcgccaacaatttcgtcgaccgctatgcagggcgcggcatttatctcgataac
tttcagctcgaggcaattgaggcccttgggcaggatcgtgacgtcctcgtctcggcgccc
accggtgcgggcaagactgtggttgcagagtatgccgttgaacttgcactggcacggatg
caaaaatgcatctacacggctccgatcaaggccctgtcgaaccagaaatatcgtgacctc
gccgagcgcctaggtgtagagaacgtcggcctgctaaccggcgatcaggccatcaacagg
gaagcctccatcctcgttgtgaccactgaagtgctacgcaacatgctcttccagcatgac
gacgtggtgggcgacgtcggctacgtcgtcctcgacgaagtccactaccttgccgacgag
tttcgcgggcccgtgtgggaggaagtcatcctgcagttgcccgcccacgtccggctggtc
tcgctgtcagccactatttcgaacgtcgaggagtttgcggcgtggctacgctcgattcgc
ggagtgaccacggtggtcgtttcgcaggttcgcccagttccgctggtccagcacgttgct
atccagcggcggatcgagccgctctacgacaacggcgagctcaacgcgcgccttgtccag
acggcgggctcccgtggccgttcgcgacgccgaaccggattggcccgccgcaagggagtc
ctcactcaactgacaagccgcgatcttctgcctgcgatcgagttcatcttctcccgcaag
ggttgcgatagggccgtgtcggatcttctcgacgacgggctgacgttgaccacgcccgcc
gagcagcgccttatccgggcacatctgcgtgcgctgcgccaggaactgacggaggaagac
cagcgtgccgttcgtttcgctttttggtcgagagcgatggtgcggggattcgcagctcac
cacgcgggcatgtttcccgccctcaaggaattggccgaggatctgatggaggcgggtctg
ctcaagctcgtctacgccactggcacgctcgccctgggaatagatatgccggtgcgcacg
gtggtcctcgaggagcttcaacgatggaatggctcggacttcgtcgatctgacggcgact
gagtacacccagctcatcgggcgtgcaggccggcgcggcaaggataaggtcggccacgcc
gtcgttttgcacagcgacgagctggacctgggcgcgttggccaatttgggttcggggagg
gtggagccgctctactcggcgttcttcccctcgtacaattcggtggtcaacctgctggct
tttcattcttacgaggatgcgcgggccatcatgggtacatcgtttgcccagtatcagcgc
aacgccgagctgggcgacttgcgtggccgcatcgcccgcattcgtgcacgcctcgaggtt
ctcgaagctgagctggaaaactcgtgcctgctgggtgacgtggccgaatatctgcggatt
cggcgtcgtagcgagagagcgagcaaggctgagcgtaagcgcgccaagcaggagtatcgc
agccgcatggagcgatcgtgggacgaggcacgaaccgggcggctctatgcgtttgcccgc
cagggggagctcgaatacggcgtcacgctctcggttggccgcaagctacggctcgtcaac
ctgtacggcgagatggtgtggctacacgaggatgagctttcttccgagttgcgcgacctg
ggcacaaacgacatgcctttcgggttgtcgcccaaggatccgcaggtgcgccaaaccatc
gcggagtccatttgggaagccatcgaggagcgctcggcgctgggaaccgacgcggatctg
acgagctcctgggaccggtttgccgtgcgatcctcggccgagctcgaggcacatccggtc
caccactgcccggacctgggcgaccatctgcgccacggcaccgagtatgtttcgctactg
aacaacctcgaatcgcttgagacgacgtcggagcgttacgacgactcggtggccaaagag
ttcgacgcgacggcgtcggtactgtctcgcctggggtatctccagccgggggagagcggc
gagagcgcggccggccacgtcaagctcgccgcgggggcggccatgctccgcggcattcac
aacgaagcggacttgctcatcgtccagtgcctgaacgaggccgccatacagggactcacg
ccagcggaattcgcaggggttacctcggccttcctctgtgaccgtcgcctcgggacggca
ctgcctcgccaggccaccctccgcgcagcgtggaccgcaattgagcgcaacctcgacttc
ctgcgcgcgctcgaggcggcggtagacatcacgcgcacctccgatcccttccccggggcc
atggaggcctttgccgcctgggcaagcggcgccgatctcgaaacggtgatgcagatgagc
gacctcgtcgtcggcgattttatctcggcaaatcggcgcctcatcgacctcctgggccag
atcgagcaagtagcacccgctgggccgctacacgagtgcgccgggcgggcgcgcgacatg
atccgccgctgggagtggctatag
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