Trueperella pecoris: HLG82_05230
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Entry
HLG82_05230 CDS
T07390
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tpec
Trueperella pecoris
Brite
KEGG Orthology (KO) [BR:
tpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpec03016
]
HLG82_05230
Enzymes [BR:
tpec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HLG82_05230
Transfer RNA biogenesis [BR:
tpec03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HLG82_05230
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QOQ38903
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Position
1091389..1092600
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AA seq
403 aa
AA seq
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MSSSTPARPLDVPRDGLPSVTNEDIDDAVARLASGRGSMAVDTERAMGLRYSNRAYLVQI
RREGAGTFLIDPVGIEDQLEDLRGVMSCEWILHAADQDLPCLHELGLYPTKIFDTEIAAL
LLGYKRVSLQALCQEVLGWTLAKEHSNADWSQRPLPPPLLAYAALDVELLHELAEKLTDQ
LVEAGRLEWFEQECEEVRLRKPAPPAKQPWRRTSRQAGIRDRRALAMLRELWRARDGVAK
RRDLAPGKVLPNQVLAELAARKPRSRSDVVNSPLFRSRQRKRDLDTWWNAIDIAWRLDER
ALPERKYTEDKDPYPPIKRWDRHDEAAAARWEVMRPKVLALAEELGIRQDLLIKPAIQKM
VAWTGWTTQEELVSLLAKNGARPWQIKQVAQPVHAALQAAKVL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcgtctacccccgcccgccctctcgacgtaccgcgagatggcttaccttccgtc
acgaatgaggacatcgacgacgccgtcgcgcgtcttgcgtccggacgcggttcgatggcc
gtcgataccgaacgtgcgatgggcctgcggtattcgaatcgggcctaccttgttcagatc
cgccgcgagggagctggaaccttccttatcgaccccgtcgggatagaagatcagctcgag
gacctgcgcggggtcatgtcgtgcgagtggatcctgcacgccgccgaccaagatcttccc
tgcctgcacgagttggggctgtaccccaccaagattttcgacaccgaaatcgccgccctg
ctcctcgggtacaagcgggtctcgctccaggcgctctgccaagaggtgcttgggtggaca
ctggcgaaggaacattccaacgccgattggtcgcaacgtccgcttcccccgccgctgttg
gcctatgcggccctcgacgtcgaactcctccacgaactcgcagagaagctcaccgaccag
ctcgttgaggccggcaggctcgaatggttcgagcaagaatgcgaagaggttcgtctccgt
aagccagcgccgcccgcgaaacagccctggcggcgcacctcccgccaggccggtatccga
gaccggcgcgccctagccatgctgcgtgaactgtggcgtgcccgcgacggtgttgccaag
cgtcgcgatctcgcgcccggcaaggtgctccccaaccaggtattggcggaacttgcggcg
agaaagccgcgttcgcgctcggacgtcgtgaactctccgctgtttcgctcgcgccaacgc
aagcgcgacctggacacgtggtggaacgccatcgatatcgcgtggcggctcgacgaacgc
gctctccctgaacgtaagtacaccgaagataaggacccctacccgccgatcaagcgttgg
gatcgccacgacgaagcagccgccgctcgctgggaagttatgcggcccaaggtgctcgcc
ctcgccgaggaactcggcatccgccaggatcttctgatcaaacccgctatccaaaaaatg
gtggcctggacgggttggacaacgcaggaggagctcgtctccttgctggcaaaaaacggc
gcgcgcccgtggcaaatcaaacaggtcgcccaacccgttcacgccgccctgcaggccgcc
aaggttctttag
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