Trueperella pecoris: HLG82_10115
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Entry
HLG82_10115 CDS
T07390
Name
(GenBank) DEAD/DEAH box helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
tpec
Trueperella pecoris
Brite
KEGG Orthology (KO) [BR:
tpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpec03019
]
HLG82_10115
Enzymes [BR:
tpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HLG82_10115
Messenger RNA biogenesis [BR:
tpec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HLG82_10115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_22
AAA_19
HA2_N
NTPase_1
nSTAND3
UvrD-helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QOQ39959
LinkDB
All DBs
Position
2214433..2217126
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AA seq
897 aa
AA seq
DB search
MVVERLIATPPELPVVAGLAAISTTPGNLVITAPPGSGKTTLVPPLMAALVHGAGLDMWA
GAEGLVGLQALARAEAGQPDGPAPKVIVVQPRRVAARAAARRIASLIGEPVGGQVGFRVR
GQTRPGSRIEMVTPGVMLRVLQRDPELAGVGALIIDEIHERDLDTDLVTAFALDVQETLR
PDLRIVAMSATVAAERFAELLGGRVVDVPGAIHPVETIDAVGPRALGDFGYGVAVSRDFL
THVARVTDDAVASRPSGRGSVLVFMPGVGEIEKMRALLAGAALPVYALHGSLPAREQDRV
LAGGEDRIIVATSVAESSLTVPGVNTVVDSGLAREPRFDPRTGISGLVTVHASRARMTQR
SGRAGREGLGRAFRCLSFARAVEFSEPEILAGDVTDATLQAAAWGNPRMEGLRLLDDPSP
ASADAAQRTLAALGAVEPGGTVAPGGAAESASAESGSAESGSAGFGRTNVPGTITRVGRL
LAELPLTPQLGRGLIEGARAVGAPTAAGVAALLSIGVRARGADLAAELRTAISRADREWT
REKARLEKIATAALAASSLEEANADGGEDGLAASGKAPGGGRRREASTADAALAAVVALA
YPTWIARRRGKGYVLAGGAGAVLPQGSPLAGEEWLAVAELGAAQGRADAVIRAAVPLTQD
DALAYGSDMLTARVETAVHGTKVTGRRIRSLGAIELGSEPVSLTRAEVAKARAEEIARVG
VGGLAWGEAATALRRRMAFLHDVVGEPWPDVSDEALAERVDEWLTPLLGAGQPDLLAGLR
ALLPWPQAARLDELAPERIPTPTGSARVDYSRHKPTARLKLQEAFGWVDTPTVAGVPVTL
ELLSPAQRPLAITEDLASFWAGPYAQVRAEMRGRYPRHPWPEDPLTAEPTRRAKPRT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atagtggttgagcgactcatcgcgacgccgccggaattgccggtggttgctggactcgcg
gcgatctcgacgacgccgggaaacctcgttattacggccccgccggggtcgggaaagacg
acccttgtcccgccgctgatggcggcacttgtgcacggggccgggcttgacatgtgggcc
ggggccgaaggtttagttgggctacaagccttggccagggcggaagccgggcagccggat
ggcccggcgcccaaggtcatcgtcgtccagccgcgccgggtggcggcgcgcgctgcggcg
cgcagaatcgcctccctgatcggcgagcctgtgggtggccaggtggggttccgcgtgcgc
gggcagacccggcccggtagccgcatcgagatggtgaccccgggcgtgatgctccgagtg
ttgcagcgcgatcctgagctggctggcgtcggggcgctgattattgatgagattcatgag
cgcgacctcgacaccgatctggtgacggccttcgcgctcgacgttcaggagacgctgcgg
ccggacctgcgcattgttgccatgtcggcgacggtggccgccgaacgcttcgccgagctc
ctcggcggaagggttgtggacgtgccgggcgcgattcatcctgtggaaacaattgatgcc
gtggggccgcgggcgttgggagacttcggctacggcgtcgcggtcagtagggacttcttg
actcatgtggcccgcgtgaccgacgacgccgtggcgagccgcccgtccgggcggggctcg
gtgctggtgttcatgccgggcgtgggtgagattgagaaaatgcgtgccctactagctggg
gcggccctgccggtgtatgcgttgcacggctcgctgcccgcgcgcgagcaggaccgcgtg
ctcgccggcggcgaggaccggattattgtggccacgtcggtggcggagtcgtcgctaact
gtgcctggcgtgaacacggtggtggattccgggctggcgcgcgagccgcgttttgacccg
cgtaccggcatctcggggctcgtaaccgttcacgcttcgcgggcacgcatgacccagcgg
tccggccgcgccggccgcgagggcctcggacgcgccttccgctgcctgagcttcgcgcgg
gccgtggagttctccgagcccgaaatcctcgccggtgacgtcaccgacgccaccctgcag
gccgccgcgtggggcaacccccgcatggagggtttgcgcctgctcgacgacccgagtccc
gcgtccgccgacgccgcacagcgcaccctcgccgccctcggcgcggtcgagcctggtggg
acggtagcgcccggtggcgccgccgagtccgctagtgccgagtcaggtagcgccgagtcc
ggcagcgccgggtttggccgcacgaacgttccaggcaccatcacgcgtgtgggccgtctc
ctcgccgaactgccgcttacgccccagctgggccgtggcctgatcgagggcgcccgggcg
gtcggagcgccgacggcggccggcgtcgcggcactcctgtcgataggtgtacgcgcccgg
ggagctgaccttgctgccgaactacgcactgccatttcacgggcggaccgcgaatggacc
agagaaaaggcacgcctggaaaagatcgctacggcagcgctcgcggccagcagccttgag
gaagcaaacgcggacggaggagaagacgggctggcggcgtcgggaaaggcgccgggcggc
gggaggagacgcgaggcatcgacggcggacgcagcgctcgcggccgtggtggcgctggcg
tacccgacgtggatcgcgcgccggcgcggaaagggatacgtgctggcgggcggcgcggga
gcggtgcttccgcagggctcgccgctcgcgggcgaggaatggctggcggtggcggagctg
ggcgctgcgcagggtcgggcggatgcggtgatccgtgccgctgtgccgctcacgcaggac
gacgcgctcgcctacggcagcgacatgctgaccgcccgcgtcgaaaccgccgtgcacgga
acgaaggtgaccggccgcaggatccgcagcctcggcgcgatcgagctcggctccgaaccg
gtgtcgctcacgcgggccgaggtggcgaaggccagggcggaggagatcgcgcgggtcggc
gtcggcggattggcgtggggagaggcggcgacggcgctacggcgtcgtatggctttccta
cacgacgtcgtgggagagccgtggccggacgtgtcggacgaggcgttggccgaacgcgtg
gacgagtggctgacgccgcttctaggcgcgggccagccggatttgctggcagggttgcgt
gcgttgctgccgtggccgcaggcggcgcggctcgacgagctcgccccggagcgtatcccc
accccgacgggcagcgcgcgcgtggactattcgcgccacaagccgaccgcgcggctcaag
ctccaagaagcctttgggtgggtggacacgccgacggttgccggcgtgcccgtgacgctc
gagcttctctccccggcgcaacgcccgctggcgatcaccgaggacctggcatcattctgg
gcgggaccctacgcccaagtccgcgccgagatgcgcggccgatacccgcgccacccctgg
ccggaggatccactcaccgccgagcccacccgcagggcgaagccgcgcacgtga
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