Treponema pedis: TPE_0572
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Entry
TPE_0572 CDS
T02803
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
tped
Treponema pedis
Pathway
tped02020
Two-component system
tped02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tped00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TPE_0572 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TPE_0572 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tped03021
]
TPE_0572 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tped02035
]
TPE_0572 (fliA)
Transcription machinery [BR:
tped03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TPE_0572 (fliA)
Bacterial motility proteins [BR:
tped02035
]
Flagellar system
Flagellar assembly proteins
Stator
TPE_0572 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
Phage_antitermQ
GerE
Motif
Other DBs
NCBI-ProteinID:
AGT43068
UniProt:
S5ZYF3
LinkDB
All DBs
Position
618837..619625
Genome browser
AA seq
262 aa
AA seq
DB search
MANINYDDIPEDELWEKYGKTSDPGLREYFILKYAPLVKYVAGKIAVGMPVNVEFDDLVG
YGVFGLLDAIEKYDLDKNVKFNTYAVNRIRGAIFDELRSIDWVPRSVRQKAREIEETIAD
IEAKLGRSAANEEIAAAMGMDIEEYNSLLLKISATSVISLTDLRFSSEDSEESSVGDTIE
APASLNPDVIVEREDIKRVIIDAIKELPEREKKVLIMYYYEDMTLREIGEVLHVTESRVS
QIHSSANIKLRAKLSGVTKGIK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatattaattacgatgatataccggaagacgaactttgggaaaaatacggaaaa
acctccgaccccggcttacgggaatattttatactcaaatatgctccgctggtaaaatat
gttgcaggcaagattgccgtaggtatgcccgtcaatgtagaatttgacgatttggtaggc
tatggcgttttcggtcttttagatgcaattgaaaaatatgatttggataaaaatgtaaaa
ttcaatacctatgccgtaaacagaatacgcggagcaatatttgatgagctgcgctccata
gattgggtaccgcgctccgtacgccaaaaagcccgcgaaatagaagaaaccattgcagat
attgaagcaaaactgggacgttccgccgcaaatgaagaaattgccgcagcaatgggaatg
gatattgaagaatataattctcttttattaaaaatatccgccacaagcgtcatttcatta
accgatttacgcttttcaagcgaagattccgaagaaagctccgtaggagatactatagaa
gctccggcttcgttaaatccggacgtaatcgtagaacgtgaagatataaaacgtgttata
atcgatgctattaaagaattacctgagcgtgaaaaaaaagttctgataatgtactactat
gaagatatgacattgcgcgaaataggagaagttttacacgttacggaatcccgcgtttca
caaatacattcaagtgcaaatataaaactgagggcaaaattatccggtgtaaccaaagga
ataaaatag
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integrated database retrieval system
