Treponema pedis: TPE_0894
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Entry
TPE_0894 CDS
T02803
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tped
Treponema pedis
Pathway
tped03030
DNA replication
tped03430
Mismatch repair
tped03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tped00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPE_0894 (dnaE)
03430 Mismatch repair
TPE_0894 (dnaE)
03440 Homologous recombination
TPE_0894 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tped03032
]
TPE_0894 (dnaE)
03400 DNA repair and recombination proteins [BR:
tped03400
]
TPE_0894 (dnaE)
Enzymes [BR:
tped01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPE_0894 (dnaE)
DNA replication proteins [BR:
tped03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPE_0894 (dnaE)
DNA repair and recombination proteins [BR:
tped03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPE_0894 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
EMG1
Motif
Other DBs
NCBI-ProteinID:
AGT43390
UniProt:
S5ZTB4
LinkDB
All DBs
Position
968870..972319
Genome browser
AA seq
1149 aa
AA seq
DB search
MESNFVHLHVHSDFSLLDGAASVKKLVAKAAELGQPALALTDHGNMFGAVVFYKACNEKG
IKPIIGCEVYVAVGSRFEKKEAPNGKKYYHLILLAKNETGYRNLMLLCSKGFIEGMYYKP
RIDEELLERHSEGLICLSACIAGELPVLLLNGETEKAEEHIRKYRKIFGAENYFIEIQDH
GIKEEKRASKLLIETARRIGVPLVVTNDIHYAEKKDAEAQDILLCIGMKKLKDDTNRMKF
EGEEFYFKSEEEMAALFPEYPEAMLNTVRIADMCNLKIPQPGPILPIYEIPEGFSSKEDY
IRSLAEEGLKKRYAEITPEIKERLDYELGVVIKMDFVGYFLIVWDFINWAKNNSIPVGPG
RGSGAGSILAYALRITDIDPLKYNLLFERFLNPERVSMPDFDVDFCFERRQEVIDYVRKK
YGDENVGQIITFGTLKAKAVVKDVGRVLNVPLADVNAITKLIPDKPLSEDVKAVSLKYAI
DIVPELKAMSEEQAYKELFEKSLVLEGSNRNTGLHAAGIVIGKTALTDYVPLYKDSKTGK
VATQFTMDLIEDCGLVKMDFLGLKTLTLIKHTEALIHKRGGEWQSFSIENIDYSDKKTFE
MLSEGKAAAVFQFESQGMQNILKRAKPNKMEDLIALNALYRPGPMDYINQFIESKFDHSK
IKYPDPCLEDILSETYGVIVYQEQVMQVAQRIAGYTLGQADILRRAMGKKKIEVMKTEKE
KFIAGALQKGFSKADADRIFEILIPFAGYGFNKSHAAAYSVLAFQTAYLKAHFPAEFMAA
NLTNEITTADKLPEYIAEAEKMGLKILPPDINQSDPYFSVSEDGNIVFGLMGIKGVGLQA
ATELSEERRKNGKYKSFLDFLERNDLHTQNKRCLEVMIKTGCFDGLGQVRSTLILNMEKA
VAYAAQKKESSSTGQASLFEDSGIKEFSDFIFEPIEDFPQKEKLRLEKELMGFYISGHPL
DEYRKVIENSETLNIAHLSRAISKKKYVLVGMLTGVRPYQTKKGKPMGFGTFEDLNGAID
LVFFSDTWEKSRAKLLPETVCGFSGTVDNSREGAASFLVDEVIDINSLQQKAISEVHIEL
DPNITLEQELVHLKDFLYERSGSCDVYIHTKEEGFDYIIKASPQLKVPATPDFAEELKVQ
FGVSQIWLE
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaatttcgttcatcttcatgttcattcggatttttcgcttttagacggagcg
gcttcggtaaaaaaacttgtagcaaaggcggcggagttgggacaaccggctttggcattg
accgaccacggtaatatgttcggagccgtcgtgttttataaggcatgtaatgaaaaagga
ataaaacctataataggctgcgaggtatatgttgctgtaggcagccgctttgaaaaaaaa
gaagcgcccaacgggaaaaaatattatcatcttattcttcttgcaaaaaatgaaacgggt
taccgtaatttaatgcttttatgctccaaaggttttattgaaggtatgtattataaaccg
cgtatagacgaagaacttttagagcggcactcggaaggccttatttgtctttccgcttgt
attgcgggggaactgccggtgcttttacttaacggcgaaacggaaaaggctgaagagcat
atacgcaagtaccgtaaaattttcggagccgaaaattattttatagaaatacaagaccac
ggaataaaagaagaaaaaagggcttcaaaacttttaatagaaacagcccgtagaatcggt
gttccgcttgtagtaacaaacgatattcattatgcggaaaaaaaagatgccgaagcgcag
gatattcttttatgtatcggaatgaaaaaactgaaagacgatacaaaccgtatgaaattt
gaaggtgaggaattctactttaaatcggaagaagaaatggcagccctttttcccgaatat
cctgaagcaatgcttaatactgtacgcattgcggatatgtgtaatttaaaaattccgcag
ccgggccctattcttcccatatatgaaattcccgaaggcttcagttcaaaagaggactat
atccgcagcttggctgaagagggattaaaaaaacgttatgccgaaattacgcctgaaata
aaagaaaggttggattatgaattgggcgtagtaattaagatggactttgtcggttatttt
ttaattgtttgggattttattaactgggcaaaaaataacagcattcccgtaggtccgggg
cgcggttccggagcgggctctattttagcttacgctctaagaattaccgatatagacccc
ttaaagtacaatttactttttgaacggtttttaaatcctgaacgcgtttcaatgccggac
tttgatgtggatttttgctttgaaagaaggcaagaggtaatcgattatgtgcgtaaaaaa
tacggagatgaaaacgtaggtcaaattattaccttcggaaccttaaaagcgaaagccgtt
gtaaaagatgtagggcgcgttttaaatgttccgcttgccgatgtaaatgcaattacaaaa
cttattcccgataagccgctttcggaagatgtaaaagccgtttctttaaaatatgcgata
gatatagtgcccgagttaaaagcgatgtcggaagaacaggcatataaggaactttttgaa
aagtcgctggtgcttgagggttcaaacagaaatacgggccttcatgcagccggcatagtt
ataggtaaaacggccttaaccgattatgttccgctttataaagattccaagacgggaaaa
gttgcaacgcaatttactatggatttaattgaggattgcggacttgtaaagatggacttt
ttaggtttaaaaactttaacccttataaagcataccgaagcattgattcataaacgcggc
ggcgagtggcaaagtttttcaatagaaaatatagattattccgataaaaaaacttttgaa
atgctgagcgaaggtaaggcggccgcggtatttcaatttgaaagtcagggaatgcagaat
attttaaagcgtgccaagccgaataaaatggaagacttaatagctttaaatgccttatac
agaccgggccctatggattacataaaccaatttatagaatcgaagtttgaccattctaaa
ataaaatatcccgacccgtgtttggaagatattctttcggaaacatacggtgttatagtt
tatcaggagcaggttatgcaagttgcgcagcgtattgcaggttatacgctgggacaagcg
gatattttacgccgcgcaatgggaaagaaaaaaattgaagttatgaaaaccgaaaaggaa
aaatttattgcgggggctttacaaaagggtttttctaaagccgatgcggatagaattttc
gaaattcttattcctttcgcaggttacggttttaataaaagtcatgcggcggcatattcg
gttttggcgtttcaaacggcatatttaaaagctcactttcccgccgaatttatggcggct
aacttaaccaatgaaattactacagccgataaattaccggaatacattgccgaagccgaa
aaaatggggcttaaaattcttccgcccgatataaatcagtcagacccttatttcagcgtt
tcggaagacggaaatatcgtattcggtcttatgggaataaaaggagtgggtttacaggct
gcaacggagctttccgaagaaaggcgtaaaaacggaaaatataaatcgtttttggatttt
ttggaaagaaatgatttacatactcaaaataaacgctgtcttgaggtaatgataaaaacg
ggctgttttgacggtttgggacaagtccgttctacgcttattcttaatatggaaaaggcc
gtagcttatgccgctcaaaaaaaagaaagctcttctacggggcaggccagtttatttgaa
gattccggtattaaagaattctccgattttatttttgagcctattgaagattttccgcaa
aaggaaaaactcaggcttgaaaaagagcttatgggtttttatatttccggtcaccccttg
gacgagtatagaaaggtaattgaaaattcggaaactcttaatatagcacacctttcgcgc
gcaatttcaaaaaagaagtatgtgcttgtaggaatgcttacgggagtacgcccctatcaa
acgaaaaaaggaaaacctatgggcttcggaacctttgaagatttaaacggagctatcgac
ctcgtgtttttttccgatacgtgggaaaaatcaagggcaaaactcttgcctgaaaccgtt
tgcggattttcgggtactgtggataactcaagagagggcgccgcttcttttttggtagat
gaggttatagatattaacagcttacagcaaaaagcaatcagtgaagttcatatagaattg
gacccgaatataactttggaacaggagcttgttcatttaaaggattttttatatgaaagg
agcggttcttgcgatgtttatattcatacgaaagaagaaggtttcgattatattataaaa
gcgtctccgcagttaaaggtgcctgcaacgcccgattttgcggaagaattaaaagtacag
ttcggtgtttctcaaatttggcttgagtaa
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