Treponema pedis: TPE_0960
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Entry
TPE_0960 CDS
T02803
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tped
Treponema pedis
Pathway
tped03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tped00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPE_0960 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tped03019
]
TPE_0960 (pnp)
03016 Transfer RNA biogenesis [BR:
tped03016
]
TPE_0960 (pnp)
Enzymes [BR:
tped01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TPE_0960 (pnp)
Messenger RNA biogenesis [BR:
tped03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TPE_0960 (pnp)
Transfer RNA biogenesis [BR:
tped03016
]
Prokaryotic type
tRNA degradation factors
TPE_0960 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
TetR_C_5-like
Motif
Other DBs
NCBI-ProteinID:
AGT43456
UniProt:
S6A3D1
LinkDB
All DBs
Position
complement(1042099..1044192)
Genome browser
AA seq
697 aa
AA seq
DB search
MKQRVTYKIGEYDLILETGHLAKQANGSIYAEYAGSAILATICASGQAQEGLDYVPLTVD
YNEKYYAAGKIPGGFIKRESRPKDKEILVSRLIDRPMRPLFKKEFGREIQLIPTCISTDM
INPPDILAVIASSAAVHISDIPFDGPVAAARVAFKNGEYIINPTFEQIETADMEIVVAGT
KDGITMVEGGANEVSEEVMLTALEKAHEMIKALCKIQEDLRGLAGKEKLPLVPLEVELEN
KQAIYDEAFPRLSKTLYLSTKMERREESDKVKEEIAEKYAEQLEDEIQLKLFNALFEEME
YNILRKNILDKGLRVDGRGTKNIRPITCEIGVLPRPHGSAVFTRGETQSLGVVTIGTVFD
EQIYDDIEGDRRENFILHYNFPPFSVGEVGRLGTGRREIGHGNLAHRSLYPMIPSREKFP
YTVRVVSEILESNGSSSMATVCSGTLSLLHAGVPMKKPVAGIAMGLITEGNDRYAILSDI
LGEEDHLGDMDFKVAGTADGITGFQMDIKIAGVSSEIMKNALAQAKEGRLHILGIMNQTI
SVPSSELSQYAPRVEMMTIPEDKIGALIGPGGKNVKAISEKYNVTINTENDGTVTIYGKD
GSSDLKGAKSIVKGITSDPEVGTVYDGVVKKIMDFGAFIEIMPGKEGLCHISKLSRSRVE
KVSDVLKEGQEIPVKLLEIDKIGRLNLSYIDALEEKK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaagagttacttataaaataggagaatacgatttaatacttgaaaccgggcat
ttggccaaacaggctaacggttcaatttatgcggaatatgcaggttccgctatcttggct
acaatttgcgcgtccggacaagcccaggaaggtttggattatgtgcctttaactgttgat
tataacgaaaaatattatgccgcgggaaaaatcccgggcggatttataaaaagagaaagc
cgacctaaagataaagaaattttagtttcgcgccttatcgacagacctatgcggccctta
tttaaaaaagaattcggaagagaaattcagcttattccgacctgtatttccaccgatatg
ataaacccgccggatattcttgcggttattgcaagctccgcagcggttcatatttcggat
attccctttgacggacctgtagctgcggcacgcgttgcattcaaaaacggagaatatatt
ataaacccgacatttgagcaaatagaaacagccgatatggaaatagtagtcgccggaaca
aaggacggcattacaatggttgaaggaggggctaacgaagtttccgaagaagttatgctt
acggctctcgaaaaggcccatgaaatgataaaggctctgtgtaaaatccaagaagattta
cggggacttgcaggaaaagaaaaattgccgcttgttcctcttgaagttgagcttgaaaat
aaacaagccatttatgatgaggcattcccgcgtctgagcaaaaccctttatctttccaca
aagatggaacgccgcgaggaatccgataaggtaaaagaagaaattgcggaaaaatatgcc
gaacagcttgaagatgaaattcagctaaaactttttaacgccctttttgaagaaatggaa
tataatattttacgtaaaaatattttggataagggtttgcgtgttgacgggcgcggcaca
aagaatatacgccccattacttgcgaaataggtgtattaccccgtccgcacggttcggcg
gtttttacccgcggcgaaacccagtctttgggagttgtaacaatcggaacggttttcgat
gagcaaatttacgacgacatcgaaggcgaccgaagagaaaattttattttacactacaat
ttcccgcctttctccgtaggtgaggtaggaagattaggcacgggaaggcgtgaaatagga
cacggaaatctggctcaccgctctctttatcctatgattccttcaagagaaaaatttccg
tacactgtacgtgtagtttccgagattttggaatctaacggctcttcttctatggcgacc
gtttgttccggaactctttcgcttttacatgccggtgttccgatgaaaaagcccgttgca
ggcattgctatgggtttaattaccgaaggtaacgaccgctatgcaattctttccgatatt
ttaggagaggaagaccatttaggcgatatggattttaaggttgccggtactgcggacgga
attacaggctttcaaatggatataaaaattgccggagtttcttccgaaattatgaaaaac
gcccttgctcaggctaaagaaggaagactgcatattctcggtataatgaaccaaactatt
tcagtccccagttcggagctttcacaatacgctccgcgtgtcgaaatgatgactatcccc
gaagataaaataggggcattaatcggccccggaggaaaaaacgtaaaagcaatttccgaa
aaatataatgtaacaataaataccgaaaacgacggaacggttactatttacggtaaagac
ggctcttccgatttaaaaggagcaaaatccattgttaagggaattacaagcgaccctgaa
gtaggaacggtctatgacggtgtcgttaaaaaaattatggatttcggagcctttatagaa
attatgccgggcaaagaaggtttgtgccatatatcgaaactttcgcgctcccgtgttgaa
aaagtttccgatgttttaaaagaaggacaggaaatacccgttaaacttttggaaatcgat
aaaatcggaaggcttaatctttcatatatcgacgcactggaagagaaaaaataa
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