Treponema pedis: TPE_2088
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Entry
TPE_2088 CDS
T02803
Symbol
ykfD
Name
(GenBank) oligopeptide ABC transporter ATPase
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
tped
Treponema pedis
Pathway
tped01501
beta-Lactam resistance
tped02010
ABC transporters
tped02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tped00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TPE_2088 (ykfD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TPE_2088 (ykfD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TPE_2088 (ykfD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tped02000
]
TPE_2088 (ykfD)
Transporters [BR:
tped02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
TPE_2088 (ykfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_19
ATP-synt_ab
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGT44562
UniProt:
S5ZPN4
LinkDB
All DBs
Position
complement(2154916..2155884)
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AA seq
322 aa
AA seq
DB search
MNNDKEILIQVRDLSRFFKVGRNKLLKAVDHVSFDIYKGETLGIVGESGCGKTTCGRTVL
GMYKATSGSVMYGSTNIHSLKGRAKVNFKKNAQYIFQDPYASLDPRMTVGDIIAEGMDVH
FKLSKAEKLERINSLLDRVGLNKEHALRYPHEMSGGQRQRVGIARSLAVEPSFVVCDEPI
SALDVSIQAQIVNLLYDLKEEMGLTFMFISHDLSMVKHISDRIAVMYLGSIVELADSNSI
YDSPMHPYTKALMSAIPVPDPKLNAGKKRIKLEGEVPSPINTPAGCKFVNRCAYAMPECG
KTAPEIKDAGDNHFVACHLFKG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgataaagaaattttaattcaagtaagggatttaagccggttttttaaagtc
ggaagaaacaaactgttaaaagccgttgaccatgtaagttttgatatttataagggtgaa
actctgggtatagtaggagagtccggctgcggtaaaaccacttgcggcagaacggttttg
ggaatgtataaggcgacatccggttccgttatgtacggttcaacaaatattcattcctta
aaaggcagagcgaaggttaattttaaaaagaacgctcaatacatctttcaggacccgtat
gcatctttggacccgagaatgaccgtaggggatattattgcggaaggtatggatgttcat
tttaagctttcaaaagccgaaaaacttgaacgtattaattctcttctcgacagggtaggg
cttaataaagaacatgctttacgttatcctcatgaaatgtcaggcggccaaaggcagcgt
gtaggaattgcccgctcccttgcagtagaaccttcatttgtagtatgcgatgaacctatt
tcggctttggacgtttccatacaggctcaaatcgtaaatttattatatgatttaaaagaa
gaaatgggcttaacgtttatgtttatttcccatgacctttctatggtaaagcatatttcg
gacagaattgcagttatgtatctgggctccattgttgaacttgccgacagtaacagcatt
tatgattctcctatgcacccgtatacaaaggctttaatgtctgcaattccggtacctgac
cctaaattgaatgccggaaaaaaacgtataaaacttgaaggagaggttccttctcccata
aatacgcctgcaggctgtaaattcgtcaacaggtgcgcctatgccatgcctgaatgcggt
aaaaccgcccctgaaattaaagatgcaggcgataatcattttgttgcctgccacttattt
aaagggtaa
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