Treponema pedis: TPE_2131
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Entry
TPE_2131 CDS
T02803
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tped
Treponema pedis
Pathway
tped03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tped00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPE_2131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tped03019
]
TPE_2131
03009 Ribosome biogenesis [BR:
tped03009
]
TPE_2131
Enzymes [BR:
tped01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TPE_2131
Messenger RNA biogenesis [BR:
tped03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TPE_2131
Ribosome biogenesis [BR:
tped03009
]
Prokaryotic type
rRNA helicases
TPE_2131
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DbpA
Cas3-like_C_2
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGT44605
UniProt:
S5ZW85
LinkDB
All DBs
Position
2203164..2204951
Genome browser
AA seq
595 aa
AA seq
DB search
MEITFKDLELDEIVLQAIEAKGFEEPTPIQILAIPRLLSGNANVIAKARTGTGKTAAFGL
PLVQELRSDTGKVRALILVPTRELAVQVAAEVESFRIEKYPRITVVYGGAPIGQQLRNLK
SGTEIVVGTPGRVMDHIERGSLKLENIEYFILDEADEMLNMGFIEDIENIFGHANPEARV
LMFSATMPKQILSIASDFMGDYEIVEEEHKEEEASLTEQFFWLVREGDKTEALVRLIDTT
PDFYGLVFCQTKVDADAVAKELDERHYEAAALHGDIPQSQREKILDKFRAKKTRILVATD
VAARGIDIEGITHVVNYAIPYDGPTYTHRIGRTGRAGAEGTAVSFIRPSEIRRIEYLRKH
ARGELKEGKIPSIESVIETKRTRILKETAAQIEKLAFEEKPEQGFTAFANKLTEYADSQT
VLAFILQMQYGKFLSPSHYKTIKPVKPEGRGGKKGKKLDEDSLRLYIGAGRRDGITKRRL
AELLSSLLSIPERLVDDIEVTDKFSLATLPKNAANDALRLCKKKRGLPDMHIDVKSSSSN
FSDERKPGFRSKMRKHDSVNRKSSSSDFSTGKRKHSEKRKNNKSDTGKAERYKKR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaattacttttaaagacctggaacttgacgaaatagttttacaggcaattgaggca
aagggctttgaagagcctacgcctattcaaattttggcaataccgcgacttctttcgggg
aacgcaaatgttattgcaaaggcaaggacggggacgggaaaaacggcggctttcggactt
ccgcttgtacaggaattgcgctccgataccggaaaggtgagagctttaattttagtgcct
acgcgggaactcgcagttcaggtagctgcggaagtggaatcgttcagaatagaaaaatat
ccgcgcattaccgttgtttacggaggcgctccaataggacagcagctgcgtaacttaaaa
agcggaaccgaaatagtagtaggaactccgggccgtgtaatggaccacatcgaaagaggt
tctcttaaacttgaaaacatagaatactttattttagatgaagccgacgaaatgctcaat
atgggttttatagaagatatagaaaatattttcggccatgcaaatcctgaagccagagta
ttgatgttttccgcaacaatgcctaaacaaatcctttccatcgcttccgattttatgggc
gattatgaaattgtagaagaagaacacaaggaagaagaggcgtctcttaccgagcaattt
ttttggctggttcgcgagggcgataaaacggaagccctagtccgtttaatagatacaaca
cccgacttttacggtcttgtattttgccaaacaaaggtggacgccgatgccgtagcaaaa
gaacttgatgaaaggcattacgaagcggccgcccttcacggcgacattccgcaaagtcag
agggaaaaaattctcgataagtttagagcaaaaaaaactcgtattttggttgcaaccgat
gttgccgcccgaggaatagacattgaaggaatcacacacgttgtaaactacgcaattcca
tacgacggccctacttatactcaccgtataggaagaacgggaagagcgggtgcggaagga
acggcggtaagttttatccgcccgagcgaaataagacgcattgagtatttaagaaaacat
gcccgcggcgagttaaaagaaggaaaaataccttctatagagtcggtaatagaaacaaaa
cggacacgtattttaaaagaaaccgcagcgcaaatcgaaaaattggcttttgaagaaaaa
ccggaacagggatttacggcctttgcaaacaaacttacggaatatgccgattcccaaaca
gtcttggcatttatccttcaaatgcaatacggaaaatttctttcaccgtctcattataaa
acaattaaacccgtaaaacctgaaggaagaggcggaaagaaggggaaaaaactcgacgag
gacagtctaaggctttatatcggcgcgggcagaagggacggaattacaaaaaggcgtctt
gccgaacttttaagctctcttttatccatacctgaaagacttgtagatgatatagaagtt
accgataaattttctcttgcgaccttacctaaaaatgccgcaaatgacgctttgcgtctt
tgcaaaaaaaagcggggacttcccgatatgcatatagacgtaaaaagttcctcttcgaat
ttttcagatgaaagaaaacccggcttccgctctaaaatgcgtaaacacgacagcgtaaac
cgtaaatcctcatcttcggatttttctacaggtaaacgcaagcattccgaaaaaaggaaa
aacaataaaagcgataccggcaaggcggaaagatacaaaaaaagataa
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