Treponema pedis: TPE_2215
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Entry
TPE_2215 CDS
T02803
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tped
Treponema pedis
Pathway
tped03030
DNA replication
tped03430
Mismatch repair
tped03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tped00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPE_2215
03430 Mismatch repair
TPE_2215
03440 Homologous recombination
TPE_2215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tped03032
]
TPE_2215
03400 DNA repair and recombination proteins [BR:
tped03400
]
TPE_2215
Enzymes [BR:
tped01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPE_2215
DNA replication proteins [BR:
tped03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPE_2215
DNA repair and recombination proteins [BR:
tped03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPE_2215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGT44689
UniProt:
S6A8Z5
LinkDB
All DBs
Position
2277253..2277906
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AA seq
217 aa
AA seq
DB search
MGSYDWISAVYDKAVFTAFDTETTGINPKDERVVEIGCVKFDTRGIIARYNVLINPEKPM
PEEAGAVNKITDEMLADKPKFPQILPDFLDFIRNTVLVAHNAGFDISFINAELERCGKTK
LTNKVFDTLTFAREVYPGLSSYALQNLAMQFGIQAISAHRAEDDARVCMEFFKIAAAHFF
EKNKGMLDYYKNGVETADYLTTKDPEVDCEKLERNLF
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttacgattggattagcgccgtatatgataaggcggtttttaccgccttcgat
acggaaactacgggcataaaccctaaagatgaacgtgtagttgaaataggctgtgtaaaa
ttcgatactcgcggaattattgcacggtataatgtgttaataaaccctgaaaaacctatg
ccggaagaagccggagcggtaaacaaaataaccgatgaaatgcttgcggataagcctaaa
ttcccgcaaatacttccggattttttggattttatacggaatacggtacttgtggcccat
aatgcgggctttgatataagttttataaacgccgagcttgaacggtgcggaaaaacaaag
ttgacaaacaaggttttcgataccctaacctttgcccgcgaagtttatcccggtctttca
agttatgcgcttcaaaacttggcaatgcagttcggtattcaggcaataagtgctcaccga
gccgaagacgatgcaagggtttgtatggaattttttaaaattgccgcagctcattttttt
gaaaaaaacaagggaatgcttgattattataagaacggagttgagacggcggattattta
actacaaaggaccccgaagtagattgcgaaaaacttgaacggaatttgttttaa
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