Treponema pedis: TPE_2339
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Entry
TPE_2339 CDS
T02803
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tped
Treponema pedis
Pathway
tped03420
Nucleotide excision repair
tped03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tped00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPE_2339 (pcrA)
03430 Mismatch repair
TPE_2339 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tped03400
]
TPE_2339 (pcrA)
Enzymes [BR:
tped01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPE_2339 (pcrA)
DNA repair and recombination proteins [BR:
tped03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPE_2339 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
TPE_2339 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
ResIII
YgfZ_barrel
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGT44813
UniProt:
S6A1N5
LinkDB
All DBs
Position
2406747..2408723
Genome browser
AA seq
658 aa
AA seq
DB search
MEDLNPEQFKAVTTINGPVLIIAGAGSGKTRVITFRIANMLEQGIPQSQILALTFTNKAA
REMEERIKELTGKKLQNLTISTFHAFGVKVLRNNIEKLGWRSNFSIYDETDRNQLIRDCG
RELKFSQDALDVYKIGVLFSNIKMGRKDWRGEHDSYQALYKEYQEGLKLYNAVDFDDLIM
LPIKLFTEYPEVLEEYRNRYRYIMVDEFQDTSTQQYNFMRLIANENICVVGDDDQSIYSW
RGASFENIKMFEKDFPNLLEIKLEQNYRSTGTILAAANGVISHNTNRKEKALWSEKDSGR
PIEIFIPENEAAEADFIADMILSLKEREHFKYSDFGVLIRANSLSRALEESFLELNIPYR
MSGGTSFFQRKEIKDVISYLRVIANPDDDINLLRIINTPRRGIGKKTIETLSALATENKC
SIRTAARLLLENPPEEMRGKSITDLQDFADLITEHRSHLLSGKGLAQKVRKLLEAIEYNE
YLIAEFQKSEKAAQFKMMNIESFLRSMEDWEKNPDNWDLNLYDYLNRITLLTRDDTEEEK
GEVNIMTIHASKGLEFPVVFIAGAEDGLIPHARSMEENEGDVEEERRLFYVAITRARQKL
FITSCRQRRKQGGLTECTPSPFLDEIPAELVEYHEPDAAAEEESIANIFSQMKQKFSI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttgaatcctgaacaatttaaggcggtaactacgattaacggccctgtttta
attattgcgggagccggttcggggaaaacgcgtgttattacttttagaattgcaaatatg
cttgaacaaggcattcctcaatcgcaaattttggctcttacttttacaaacaaagcagcc
cgcgaaatggaggaacgtataaaagaattaaccggaaaaaaattacaaaatttaacaatc
agtacttttcacgctttcggagtaaaggttttacgcaataatattgaaaaactgggctgg
cgttccaatttcagtatttacgatgaaaccgatagaaatcagcttatacgagattgcgga
agagaacttaaattttctcaagatgccttagacgtttataaaataggagtgcttttttcc
aatataaaaatgggaaggaaagattggcgcggtgaacacgattcttatcaagccctgtac
aaagaataccaagaaggccttaaactttacaatgcggtggacttcgacgacttaattatg
ctgccgattaaactttttacggaatatcctgaagtccttgaagaatataggaacagatac
cgctacataatggtagacgaatttcaggataccagtacacagcaatataattttatgcgc
ctgattgcaaatgaaaatatttgcgtcgtaggagatgacgaccaatccatttactcttgg
cgcggcgcaagttttgaaaatatcaaaatgtttgaaaaagactttccgaatcttttggaa
attaaattggaacaaaactaccgctcaacgggaacgattttggcggcggcaaacggcgtt
atttcgcataacacaaaccgtaaagaaaaggctctttggtctgaaaaagattcggggcgc
ccgatagagatttttatccccgaaaatgaagccgccgaagcggattttattgccgatatg
attttaagtttaaaggagagggagcattttaaatattccgatttcggagtattaattaga
gcaaacagtttaagccgagccttggaagaatcttttctagaacttaacattccgtacaga
atgtcgggcggaacaagtttttttcaacgtaaagaaattaaagatgtaataagttatctt
agggtaattgcgaatcctgatgatgatataaatcttttacgtattataaatacaccgcgc
cgaggtatcggaaaaaaaactatagaaactctttccgctcttgctacggaaaataaatgc
tctatacgtactgccgcccgccttcttttggaaaaccctcctgaagaaatgcggggtaaa
agcattaccgatttacaggactttgccgatttaattaccgaacaccgttctcacctttta
tcgggcaagggacttgctcaaaaggttcgaaaacttttggaagctattgaatataacgaa
tatcttattgcagaatttcaaaaaagcgaaaaggccgctcaatttaaaatgatgaatata
gaaagttttttacgctctatggaagactgggaaaaaaatcccgataattgggatttaaat
ctttatgactatttaaaccgtattacgcttttaacccgcgacgatacggaagaagaaaaa
ggtgaagtaaatataatgacaatccatgcttccaagggtttggaatttccggttgtattt
attgcaggagccgaagacggtcttattcctcatgcaagaagtatggaagaaaatgaaggt
gatgtagaagaagaacgccgccttttttacgttgcaattacacgggcaagacaaaaactt
tttattacaagctgccgtcaaaggcgtaaacaaggcggcttaaccgaatgcactccttct
ccgtttctcgatgaaatccctgcggagttggtagaataccacgagcccgatgcggctgcg
gaagaagaaagtatcgcaaatattttcagtcaaatgaaacaaaaattctcgatataa
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