Tunicatimonas pelagia: P0M28_02105
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Entry
P0M28_02105 CDS
T09207
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tpel
Tunicatimonas pelagia
Pathway
tpel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0M28_02105 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpel03019
]
P0M28_02105 (recQ)
03400 DNA repair and recombination proteins [BR:
tpel03400
]
P0M28_02105 (recQ)
Enzymes [BR:
tpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P0M28_02105 (recQ)
Messenger RNA biogenesis [BR:
tpel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0M28_02105 (recQ)
DNA repair and recombination proteins [BR:
tpel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P0M28_02105 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
MarR_2
ResIII
HEM4
HTH_38
GerE
DUF6115
LexA_DNA_bind
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WKN43764
LinkDB
All DBs
Position
527765..529921
Genome browser
AA seq
718 aa
AA seq
DB search
MSTQSLFSSLLPTLEKYFGYTAFRENQREIIETILAGQDTLVLMPTGGGKSLCYQIPAIL
LGGLTVVVSPLISLMKDQVDALRLNGIKAAYLNSSLSPEEQQQVFRQLRQQELKLLYLAP
ERLIDAENRFITFLKSINTSLLAIDEAHCISQWGHDFRPEYRMLADIRKALDDVPTVALT
ATADPVTQQDILDKLQLRQPKVFISSFNRENIYYQVAPKRQSYAQLLDFLAERRDQSGII
YVLSRASTEDLAERLTQDGFPAKPYHAKLASQVKEKHQDEFLKDEVPIVVATVAFGMGIN
KSNVRFVVHMDLPKNIEGYYQETGRAGRDGLASNALLFYSYADVIKLQGFVEVAGNQEQS
RVLREKLQQMAIFADLRSCRRKFLLNYFGEEAPDYCGSCDVCRNDYKTFDGTVIAQKALS
AVARLGERFGGGYVIDFLRGSKSEKIWQEHKQLKTYGAGADVSKKDWHRYLNDLLRLGYL
QKSDDKFPTLQLTEQSWSVLKGQEKVTLVEIAEPEAITIKSSAKPMDEHLFSLLKGLRRQ
LAQDENVPAYVIFSDATLQEMATYLPTQPEDLPHISGFGEVKIAKYGSAFLDEINQYCTE
HDLDSRMSQLRRRSRKKQAAKPKTDTKQRTYDYYQQGKTIAEIARARNLSTNTISTHLAY
FVQNGSVDVTKLVDPATITKIEDAIYVHGNRALKPLKDSLDDSISYDEIRLVIAHQHR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccaatcgctcttctcctcactgctcccaacccttgaaaaatactttggctac
acggcttttcgcgaaaatcagcgagagattatagaaactattctcgccggacaagatacg
ttggtgctaatgcctactggtgggggaaaatcactgtgctaccaaattccggctatttta
cttggcgggcttaccgtagtagtctctccactcatttcgctaatgaaagatcaggtagat
gctctacggctcaacggtattaaagccgcgtacctgaattcttccctaagcccggaagaa
cagcagcaagtgtttcgtcaactacggcagcaagaactgaaattactgtacctagctccc
gagcgactaattgatgctgaaaatcgatttatcacctttcttaaaagtattaacacctcg
ctactggccattgacgaggcgcactgtatctcgcagtgggggcacgacttccgaccggag
taccggatgctagctgatattagaaaagcattggacgatgtgcccacggtggcactcacc
gccacggctgatccggtgacccagcaggatattttggataagcttcagcttcgccaaccc
aaagttttcatctctagctttaaccgggaaaatatttattaccaagttgcccctaaacga
cagagttacgctcagctactcgattttctggccgagcgtcgcgaccaatcgggaattatc
tacgtgctttcccgagcctcaaccgaagatttagccgaacgattaacccaagatggattt
ccagctaagccttaccatgctaaactagccagccaggtgaaggaaaagcatcaagacgaa
ttcttgaaagatgaagtacccattgttgtggctacggtagcatttggaatgggaatcaat
aaatcgaatgtgcgatttgtggtgcatatggatttgccgaaaaatattgaaggttactac
caggaaaccggacgggcggggcgcgacggactggctagtaacgccctactcttttacagt
tacgccgacgtaattaagctccaggggtttgtagaggtagcgggtaaccaagagcaaagc
cgggtgctacgcgaaaagctccagcaaatggctatttttgccgacttacgtagctgccga
cgcaagtttctgttgaactattttggtgaggaagctcctgactactgcggtagttgcgac
gtttgccgtaacgattataaaacattcgacggtaccgtcattgcccagaaagcactatcg
gcagtggctcgactgggtgaacgttttggcggaggttatgtaattgattttctacgaggt
tcaaagtcggagaaaatctggcaagaacataagcagctaaaaacctacggggccggagcc
gatgttagtaaaaaagactggcatcgttacctgaacgacttgctacgcctgggctatttg
caaaagtccgacgataagtttcctacgctacaacttactgaacaaagctggtcggtactg
aaggggcaagaaaaagtaacgttggttgaaattgctgaacctgaagcgatcacgatcaaa
tcgtcggccaaaccgatggacgaacatcttttttcactactgaaagggctacgccgccag
ttggctcaagatgaaaatgtgccggcttacgttatattttctgatgctactctacaagag
atggctacttatttgcctacgcaacctgaagaccttccgcatattagcggctttggtgaa
gtgaaaattgccaaatacggctccgcttttctcgacgagattaatcagtactgcactgag
cacgacttggactcccgtatgtcgcagctccggcgacgctcccggaaaaagcaagctgct
aaacccaaaactgataccaaacaacgtacttacgactactaccagcaaggcaaaacaatt
gctgagattgcccgagcacgtaacttgagtactaacaccatcagtacccatttagcctat
tttgtgcagaatggttcggtagatgttaccaaattggttgatccggctactattactaaa
attgaagatgccatctacgtacacggcaaccgagccttaaaacctctcaaagattcgtta
gatgacagcatcagctacgacgagatacgactagtgattgctcaccaacatcggtag
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