Tunicatimonas pelagia: P0M28_03670
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Entry
P0M28_03670 CDS
T09207
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
tpel
Tunicatimonas pelagia
Pathway
tpel02020
Two-component system
tpel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P0M28_03670 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P0M28_03670 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpel03021
]
P0M28_03670 (rpoN)
Transcription machinery [BR:
tpel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P0M28_03670 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
DUF1474
LacI
MarR
HTH_IclR
Ribonuc_red_sm
SF3b1
Motif
Other DBs
NCBI-ProteinID:
WKN44065
LinkDB
All DBs
Position
909223..910677
Genome browser
AA seq
484 aa
AA seq
DB search
MQKLGLNQTLSQRLSPQQIQFIKLLQIPTAELEARIEQELEVNPALEEGRDNEEEVPVTT
EDDFADSEQEDYSEEISVEDYLAEDEFSGYKMQGDGSYNDEDDKDLPMPTAVSLVEQLTT
QLNFLRLDERRQQIGLQLIGSIESDGYIRRDLEAIVNDLAFSLNIDTDAEELEEILSKIQ
QFDPSGIGARDLQECLLLQLERKPEHDRYTRVAIDIIENNFKEFTKKHFDKICRKLGVDE
NTLREAINIITKLNPKPGGVDTGLASRTQYIVPDYILTNDNGKLELTLNSKNAPELKVSR
SYSNMLQAYDKSNKKDKKLKEEVSFVKQKLDSAKWFIDAIKQRQNTLLNTMETIVKYQYD
FFLTGDESNLRPMILKDIANEIGMDISTVSRVANSKSVQTEYGTYLLKYFFSEGIATDSG
EDVSSREVKNYLKELVDNEDKRKPLSDDKLEKLLKDKGYNIARRTVAKYREQLQIPVARL
RKEL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcttggtttaaaccaaaccctcagccaacgattatcgccgcagcagatccag
tttatcaagctgctccagatacctacggctgaattggaagcccgtattgaacaggaacta
gaagttaatccggccttggaagaagggagggataatgaggaagaagtgccagtgactact
gaagatgattttgccgatagtgagcaggaggattattcagaagaaattagtgtggaggat
tatctggctgaggatgaatttagcggctataaaatgcagggcgacgggtcttacaacgac
gaagatgataaagatctaccgatgcccaccgcggtttcgctggtagagcaacttactacg
caactcaattttcttcggcttgatgagcgacgccagcaaattggcttgcagcttatcggc
agcattgagagcgatggctacattcgtcgcgacttagaggccatcgtaaacgatttggct
ttttctctcaacattgataccgatgccgaagagctagaagagatactaagtaagattcag
cagtttgatccatcgggcattggtgcgcgtgaccttcaagagtgtttgctactacagttg
gagcgtaaaccagaacacgaccgctacacccgcgtagctatcgatattattgaaaataac
ttcaaagagtttaccaagaagcactttgataaaatctgccggaagttaggcgtagatgaa
aataccctgagggaggcgatcaatattattaccaaactgaaccctaagcccggcggagta
gatactggtttggcttcccgaactcagtacatcgtacctgattatattctaaccaatgat
aatggtaagctcgagctaacgctaaactctaaaaacgctccggaactgaaagtcagtcgt
tcttactctaacatgcttcaggcttatgacaagagcaacaaaaaagataaaaagctgaag
gaagaggtttcttttgtaaagcaaaagctcgattcggctaagtggtttattgatgccatt
aagcagcggcagaacaccttgcttaataccatggaaaccattgtgaagtatcagtacgat
ttctttttgactggcgatgaaagtaacctccgcccgatgatcttgaaggatattgccaat
gaaattggaatggatatatccactgtttcgcgggttgctaacagcaaatcggtgcaaacg
gagtacggcacctacctattgaagtacttcttttccgaaggtatcgctactgactcagga
gaggatgtcagcagccgagaagtaaaaaattacttgaaagagctggtagataatgaggat
aagcgcaagccactttcggacgataagttagaaaagctcctcaaagataaagggtataat
attgcccgacgcacggtagctaagtatcgggagcaactgcagattccggtagcccgatta
agaaaagaactttaa
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integrated database retrieval system
