Tunicatimonas pelagia: P0M28_05225
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Entry
P0M28_05225 CDS
T09207
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpel
Tunicatimonas pelagia
Brite
KEGG Orthology (KO) [BR:
tpel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpel03032
]
P0M28_05225
03400 DNA repair and recombination proteins [BR:
tpel03400
]
P0M28_05225
Enzymes [BR:
tpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P0M28_05225
DNA replication proteins [BR:
tpel03032
]
Prokaryotic type
DNA Topoisomerases
P0M28_05225
DNA repair and recombination proteins [BR:
tpel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P0M28_05225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WKN44365
LinkDB
All DBs
Position
1260882..1261901
Genome browser
AA seq
339 aa
AA seq
DB search
MGFPLMSGLPQGLIYQDDSQPGYLRKKWGRGHSYFDKQAKLREEKTLTWIQSLGIPPDWD
DVWISKDPNGHLLATGYDAKGRKQYYYHPSWAEYRNKVKFDKLALFGRKLPIVRLKVTKD
LEKRGWPKEKVLALILQVLDEYGIRIGNEQYKRENKTFGLTTLRRKHLDFEEGHARLEYR
AKSGKYRKINIKQNQLVRLIKRCSELPGYEVFKYRGQDGKYHHIRSQDVNEYLQDIVGEQ
FTCKDFRTWHGTVTAIDKWKDAQALQTKNPRLKLETTIIKLVAKELGNTISVCRKYYIHP
EVLKALLENTWEVEKELKIKPTHLKQLDKYEITALSIIS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggatttcctttaatgagtgggctcccacagggtttaatctatcaggacgattcgcaa
cctggctacttacgcaaaaagtggggacggggtcactcgtattttgataagcaggctaag
ctacgggaagaaaaaacgctaacttggatacaatccttgggcattccacccgactgggat
gatgtgtggatatccaaagatccgaacggacatctgttagctactggctacgatgccaaa
ggccgcaagcagtactactatcacccttcctgggctgaataccgaaacaaagttaagttt
gataaattggctttgtttggtagaaagttaccaattgttcgtttgaaagtaacgaaagac
ttagaaaaaaggggttggccgaaagagaaagtgttagcacttattcttcaggtgctcgac
gaatacggtatacgcattgggaatgagcagtataaacgagagaataagacctttggactt
actacattacgaagaaagcatctcgattttgaggagggtcacgcccgcttagaatatcga
gctaagagcggtaagtaccgcaagatcaatatcaaacagaatcagttggttcggctaatt
aagcgttgttcggagctgcctggttacgaagttttcaagtaccgggggcaagacggaaaa
taccaccatattcgttcccaagatgtaaatgagtacttgcaagatatagtgggtgagcaa
ttcacctgcaaggattttcgtacttggcacggtaccgtcaccgccattgataagtggaaa
gatgctcaagcactacagacaaaaaatcctcgcctgaagctagaaaccaccattataaag
ctagttgccaaggaattaggtaatactattagtgtgtgccgtaagtattacattcacccg
gaagtactaaaagccttgttagaaaacacatgggaagtggaaaaagaactcaaaataaag
ccgacccatctcaaacaattggataagtatgagataaccgctctaagcattatcagctag
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