Tunicatimonas pelagia: P0M28_05870
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Entry
P0M28_05870 CDS
T09207
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tpel
Tunicatimonas pelagia
Pathway
tpel00550
Peptidoglycan biosynthesis
tpel01100
Metabolic pathways
tpel01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tpel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P0M28_05870 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
P0M28_05870 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpel01011
]
P0M28_05870 (mrdA)
Enzymes [BR:
tpel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
P0M28_05870 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tpel01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
P0M28_05870 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WKN44490
LinkDB
All DBs
Position
complement(1412314..1414125)
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AA seq
603 aa
AA seq
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MINNNRKFVIRLTFILIAGIYLVKLFAIQVLNEDYQARADSNIIDREIRYPFRGLIYDRN
GKLIVYNAPVYNLEVVPKDVQLKDTLAFCEIFGITKEEFDEKIMKAKQYSYVKPSVFIKQ
ISNNTFASVQDYLVDFPGFRIQARTNRSYTYRSLANALGYIGEVSPGQLERDEENFYRQG
DYIGILGIESKYEEQLRGKRGVKYKMVNVRGVEKGSYKDGTFDTLSIAGENLVSTVDINL
QEYAETLMMGKRGSIVAIEPKTGEILSFVSAPFYDPNLLTGRDYGKNYSKLASDTTKPLF
NRPLMGAFPPGSIFKIVQALIGLEEGVITPNTRFRCERGIIDCHGPHTNEDLRGAIRVSC
NPYFWNVYRRLLNQGASENTFVDTEIGLEKWRKYVTSFGLGHPLGVDLPHERAGYVPGPS
LYDKIYGDNRWKFSTIYSNAIGRGELQIVPLQMANLAAIIANRGYYITPHMIKSIGEDGQ
SLAQYQEKNYTDVSPEYFEIAVEAMSDVIKSGTGMRANLPDIEVCGKTGTVDNEDRGEED
HSVFIAFAPKDDPKIAVAVYVENAGQGARAAAGISGLMIEQYLKGCTERPHMEEFVLNGD
FIY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaacaatcgtaaatttgtcattcggctcactttcattcttattgccggtatc
tacctggtgaagttattcgctattcaggtacttaatgaagactatcaagccagagctgac
agtaatattattgatcgggaaattcgctaccccttccgtggtctgatttacgaccgcaac
ggaaagctaatcgtatataacgctccagtgtacaacttagaagttgttccgaaggatgtt
cagctaaaagatacgctggcgttttgcgagatattcggaattaccaaggaagagttcgat
gagaaaataatgaaggctaagcaatactcctacgtaaagccttcagtgttcatcaagcag
atttccaacaatacatttgcttcggtacaagattacttggtcgatttccccggattccgc
attcaagcacgtaccaatcgctcatacacttaccgaagtttagctaatgccctagggtac
atcggtgaggtgagtcctggtcagctagagcgagatgaggaaaatttttatcggcaaggc
gactatattggtattctgggtattgagtcgaagtacgaagagcaactgcggggtaagcgg
ggcgtgaagtacaaaatggtaaacgtacgaggggtagaaaaagggtcgtacaaagatggt
acttttgataccctttctattgcgggagaaaatttggtgagcacagtagacatcaaccta
caggaatatgccgaaacgctaatgatgggcaaacggggtagtattgtagcgattgaaccc
aaaaccggtgaaattctttctttcgtatcggcaccgttttatgatcctaatttattaact
ggaagagactacgggaaaaactatagtaaactggcctcagataccaccaaacccctgttt
aatcgcccgctgatgggagcgtttcccccaggttcaattttcaaaatcgttcaggcactg
ataggtttagaagaaggggtgattacgcctaatacccgctttcgctgcgaacgaggaatc
attgattgtcacggccctcatactaatgaagatttgcgaggggctattcgggtatcctgc
aacccgtacttctggaacgtctaccgccggctgctcaaccaaggagcatctgaaaatacc
tttgttgacactgaaattggcctggagaaatggcgtaaatacgtaactagctttggctta
ggtcatccgttaggtgttgatttaccgcacgagcgggcaggatatgtgcccggcccctct
ttatatgataaaatatacggagacaatcgctggaaattctctaccatttactctaatgct
attgggcggggggagttacaaattgtacctctgcagatggctaacctggcagcgattatt
gctaatcgggggtactacatcactccgcacatgataaaatctatcggcgaagatggacag
tctctcgcccagtatcaagaaaagaattataccgatgtgagccccgagtattttgagata
gcggtggaagcgatgtctgatgtaattaagagcggaaccggtatgcgggctaacctacct
gatattgaggtctgtggtaaaaccggaaccgttgataatgaagatcggggagaggaagac
cactcggtgtttattgcctttgcccctaaggatgatcctaaaattgctgtcgccgtttac
gtagaaaacgctggacagggagcacgggctgctgctggtatttccgggctaatgattgag
cagtatctgaagggttgcaccgaacggccgcatatggaggaatttgttttgaacggagac
tttatttactaa
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