Tunicatimonas pelagia: P0M28_07440
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Entry
P0M28_07440 CDS
T09207
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tpel
Tunicatimonas pelagia
Pathway
tpel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0M28_07440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpel03019
]
P0M28_07440
Enzymes [BR:
tpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P0M28_07440
Messenger RNA biogenesis [BR:
tpel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0M28_07440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WKN44797
LinkDB
All DBs
Position
1772938..1774215
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AA seq
425 aa
AA seq
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MTFQDLEITEPILKALQAQGYTHPTPIQQKAIPVLLRKRDLLGCAQTGTGKTAAFSVPIL
HHLHLDRQRSTKRRKIKALIVTPTRELAIQIGDNFTAYSKFTTIKNTVIFGGVKQGAQVQ
ALQQGVDVLIATPGRLIDLLGQGIITFRDIEYFVLDEADRMLDMGFIHDIRKIIARLPEE
RQSLFFSATMPPDIVDLSRKILGNPEKVVVKPEQTTAEKVRQSIYFVEKKGKIKLLTHLL
QTEPIKSVLVFSRTKHGANKIVKLLDRANIRASAIHGNKSQTARQKALNSFKSGELKVLV
ATDIAARGIDVEELSHVVNYDLPNVPETYVHRIGRTGRAGASGKALSFCDTEERAYLRDI
QKTINQKIPVVADHPFTGEGFEPTADQRTTQQKPSSRPRTAVAENDNATKPKSRRPYWKK
RRPQK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcaagacttagaaattactgaacccatactaaaggcgttacaagctcagggg
tacacccatcctactcctattcaacaaaaagcgattccggtgctgcttcgtaagcgagat
ttgctcggttgtgctcaaacgggcacgggtaaaacggctgctttttccgttcccattctt
caccaccttcaccttgatcggcaacggtcaacgaagcgacgcaagattaaagccctaatc
gtaacccccacccgggaactggctattcagataggggacaactttacggcttacagcaaa
ttcactactattaaaaacacagtcatttttggtggagtgaagcaaggcgcgcaagtgcag
gcacttcagcagggcgtggatgtactgattgctaccccgggtcgcctgatcgacttgctc
gggcagggcatcatcacctttagggatattgaatactttgtgctcgatgaggccgaccga
atgctagacatgggctttattcatgacattcgaaagattattgcccggctgcccgaagaa
cggcaatcgctattcttctcggccaccatgccccctgacattgtggatttatcgcgtaaa
attctgggtaaccctgaaaaagtggtggtaaaacctgagcaaaccacggcggagaaggtg
cggcagtctatttattttgttgagaaaaaagggaagattaagctgctgactcacttactg
caaaccgaacctattaagtcggtactggtgttttcccgaaccaagcacggagccaacaaa
attgtaaagctgctcgatcgggcgaatattcgggccagtgctatccacggcaataaatcg
caaacggcacgacaaaaagcactgaatagctttaaaagtggcgaattaaaggtactggtc
gccaccgatattgccgctcgaggcattgatgtagaagaactgtcgcacgtagtgaattat
gatctgcctaatgttcctgaaacctacgtccatcgcattggacgcaccgggcgggcgggt
gccagtggaaaagcactgtcgttctgcgatacggaggagcgggcgtacctgcgcgatatt
cagaagacgatcaatcagaaaattccggtagttgctgaccatcctttcacaggcgaaggt
tttgagcctacggctgaccagcgtactacccagcagaagccatcatcaagaccacgaacc
gcggtagctgaaaacgataatgctacgaaaccgaagtctcgccgcccgtattggaaaaag
cgtcggccacagaaataa
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