Tunicatimonas pelagia: P0M28_07620
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Entry
P0M28_07620 CDS
T09207
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
tpel
Tunicatimonas pelagia
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF_2
GAF
GAF_3
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA
AAA_16
AAA_7
AAA_3
YqgQ-like
AAA_2
Motif
Other DBs
NCBI-ProteinID:
WKN44830
LinkDB
All DBs
Position
complement(1815751..1820562)
Genome browser
AA seq
1603 aa
AA seq
DB search
MINDFRLLTRLSTAIASTRDTTELLRTIVTELQSVFGFYDIGLFVVNEAEDYCYDLAVLD
PSISPSAANLSQSYTDYAKRLYYHGSPIEFMVQQSITAEGPVLLDFAELTKQFADYPAAD
VLAHLKFRDCLITTLQARSELIGMFCLNSLEKDHFRPEQFALFQAVADQVAVALSHVLAN
EEVLAQKQRIEQLLTISQAITEVKDRKQLLKTIYERIRPIFPYDSYGLFVLTEDKQYHYE
LVDAEVMDDDPTMMAIEQQYGAHHRYEHAGSNVEHWMQAGPGLFRLADHMNHPQASIAYQ
LGWRRLIAGPLTYGGEAIGMLCFASEQEDFYTEQHLPMFEAISEQVSVAAANVLANERVL
AQKQRIEQLLTISQAITEVQDRKQLLKTIYERIQPIFPYDSYGLFVLTEDKQHHYELVDA
EIVNFWVQDAIEQQHGRHYRYHHPGSVVDTMMQQGSGLFLIEDFLNDHPQLPMMHDAGLR
QMIGGPLTYGGEAIGMICFNSKQEDFYTETYLPLFTAIAEQMSVAVANVLANERLVEEKQ
FKETLLGISEAVASIHDRKQLLKTIFEQVKPIFGFYDVGLFVLDEEGNVSDWATVMPEIS
ESVVNEAVNQSGVEKIPFKDSALEWVFNQLHEARGLMILPYEKIAFDRFPDYYQFQAIQA
VGYQESLMALLNIGGKHIGMLAFNSLEADFFSASQFPLFQAIADQLAVAVNNVMSSEKVL
KREQEKTQLLKITEGVTRLRSLPEFLQYVMEILQPIFRFEDVGVFLLSEEGQFHSDVAGI
YPNISESALSFKIVEQGTKKVHHPDSLIEWMMAEIDASDRVKLFDFKELNKKFPDYYQFQ
LYDFPDDGYRDCLAANLRVGDRTLGMFCINAKAINFFPPEQHTLFKNVTEQLSVAVGNIM
ATEQLLEEKQFKETLLGISEAVASIQDRQQMFKVIYNKVSPYIPMDYLAVIVLDNQDTSW
QDLVSSKHHFDPQDPRSLMAVGLAGFHPVDSMTRKTTQQTGIITKEELLAYQDFPLSDFI
ERSPVQHFMYTPLKTANKVFGSLILNSFRKNAYNEAYFPLFQAIADQLAVAVSNVLANEQ
IRQKADEKALEVELIKALELHDGLPEKFEAIADILQNHLSFRMIGCTTADTAQPFCHYLM
ATGKGEYQVLDKGKLIDLLALSNQDFYKLQQQRKRYHTLTDFPEGGTTELLATHIANKWQ
MGSILSLSVPLSQHTNAYIDLFAQKKQAYSTEQLTLMERLVDTLALALDRQLAQIEIARL
NDQLRQENEYLLEEVTRKYHFSEIIGQSDSLQRMFRQIEQVASTDATVLVQGETGTGKEL
VARAIHQASPRSQHLLVKINCAAIPESLFESELFGHEKGAFTGAMQQRIGKFELAHRGTV
FLDEIGELPLSMQAKLLRVLQEQEFERVGGNIPIKSDFRVVAATNRTLLESVATGKFRAD
LYYRLSTFPIGLTPLRERPEDIPLLAEHFARQYSRHIGQPYRGFTKGAMRTLKHGDFPGN
VRELRNIVEHAVIVASGRKIDGVLSKMIPSAKPVLSGASPLPPSDQITEAYISEQKDALE
RQALLKVLEATHWRVRGKKGAAQMIGLNPSTLESRMKKLGIER
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgatttccgtctgttgacccgcctgagcaccgccattgccagcacccgcgac
acgaccgagctgctccgcactatcgtcaccgaactacagtcggtatttgggttctacgac
ataggtttgtttgtggtgaacgaagcagaagactactgctacgatctagcggtgttagat
ccttctattagtccatcagcggctaacttgtcgcaatcttacacggattatgcgaagcgg
ctgtactatcatggctcacccatcgagtttatggtacaacaaagtatcaccgcagaaggg
ccggtgctgctcgactttgctgaattgacgaaacagtttgccgactatccggccgccgac
gtcttagcgcatcttaagtttcgtgactgcctaattaccaccctacaggcacgcagcgaa
ctgatcgggatgttttgcttaaatagcctagagaaagatcacttccgccccgagcagttt
gctttgtttcaggcggtggccgaccaggtggccgtagctctgagtcatgtgctggctaat
gaagaagtgctcgcccagaagcaacggatagagcaactgctcaccatcagccaggctatt
accgaggtaaaagaccggaagcaattgcttaagaccatctacgagcgcatcaggcccatc
ttcccctacgacagctacggcttgttcgtactcaccgaagataagcagtatcactacgag
ttggttgacgctgaggtgatggatgatgatcctacgatgatggctattgagcagcagtac
ggagctcatcatcgttatgagcacgctgggtccaatgtggaacactggatgcaggcaggg
ccaggattgtttcgtttggctgatcatatgaatcatccgcaggcttccatcgcctaccag
ctaggctggcgccgacttatcgcggggcctttgacctacggcggggaagccatcgggatg
ttgtgcttcgcgagtgaacaggaagacttctacaccgaacagcatctaccgatgtttgaa
gcaatcagtgaacaggtgagcgtagctgcggccaatgtgctggctaatgaacgggtacta
gcccaaaagcaacggatagagcagttgcttaccatcagccaggccatcaccgaagtgcaa
gaccgaaagcagctactcaagacgatctacgagcgcatccagcccatcttcccctacgac
agctacggcttgtttgtgctcaccgaagataagcagcaccactacgaactggtggatgcc
gaaatagtaaatttttgggtccaagatgctattgagcaacagcacggaaggcattaccgc
tatcatcatccgggttcagtagtagacacgatgatgcaacagggatccggattgtttttg
atagaagacttcttaaatgatcatccgcaactaccgatgatgcacgatgctggactacga
caaatgattggcggaccgctgacttacggaggagaggcgattggaatgatctgctttaat
agtaagcaggaagatttctacaccgaaacgtatctgccactgttcaccgccattgccgag
caaatgagtgtggcggtggccaacgtgctggccaatgaacggttagtggaagaaaagcag
ttcaaagaaaccctactgggtatcagcgaggcggtggccagtatacacgatcgaaaacaa
ctactcaagacgatattcgagcaagtcaaacccatctttggcttttatgatgtagggctc
tttgttctcgatgaagaaggaaatgtttcggattgggcaacggtaatgcctgaaatatct
gaatctgtggtaaatgaagcggtcaatcaatccggtgtagagaaaataccctttaaggac
tctgccctggaatgggtttttaatcagttgcacgaagcccgtgggctaatgatactgcct
tatgaaaaaatagcatttgaccgttttcccgattattaccagtttcaggcgattcaagca
gttggctatcaagaatccttaatggctttactcaatattgggggaaaacacattgggatg
ctcgcattcaactcattggaggctgatttcttctcagcatctcagtttccactttttcaa
gccattgccgaccagctagcggtagccgtcaacaatgtgatgtctagcgaaaaagtgctt
aaacgtgaacaagaaaaaacccagttgctcaagattaccgaaggggtgacccgtctgcgc
agcttgcccgagtttttacaatatgtgatggagatacttcagcccatcttccggtttgag
gatgttggtgtgtttttactatcagaggaaggccaatttcatagtgatgttgccggaata
taccctaatatttcagaatcagccttaagcttcaagattgtcgagcagggaaccaagaag
gtccaccatccagattcgctcatcgagtggatgatggcggaaatagatgccagtgatagg
gtgaaattgtttgactttaaggaactaaacaaaaagtttcctgactattaccagttccaa
ctctatgattttccagatgatggttatcgcgattgtctggcagccaacctaagagtgggc
gatcgtacattgggtatgttctgtatcaatgcaaaagcgatcaatttttttccccctgag
cagcacaccctgttcaaaaatgtaaccgagcagctttcagtagccgtaggcaacatcatg
gccaccgaacaactgttagaagaaaaacagttcaaagaaaccctgctgggtatcagcgag
gccgtagccagtatccaggatcgccagcagatgttcaaggtgatctacaacaaggtgtcc
ccctacattcctatggactacctggctgttatcgtgttggataatcaggacacgtcctgg
caagacctggtctcttctaagcatcactttgatccccaggacccgcgtagtttgatggcc
gtcgggctggctgggtttcatcccgtagattccatgacgcgcaagactacccaacagaca
ggcatcatcaccaaagaagaattgcttgcgtaccaggactttccgttgtccgactttata
gagcggtcaccggttcagcactttatgtatacgccgctaaaaacggcgaacaaagtattc
ggaagtctgattctcaactcgttccggaagaacgcgtacaacgaagcttactttcctctt
ttccaggccattgccgatcaactggccgttgcggtgagtaacgtactggcgaacgagcaa
atacggcaaaaagctgatgaaaaggccctagaggtagagctcattaaagcactggagctg
catgacggtttgcctgagaagtttgaggccattgccgacattttgcaaaatcatttatcc
ttccggatgatcggctgtactaccgctgatactgctcagccgttttgccattacctgatg
gctactggaaagggagaatatcaggtattggataagggcaagctgattgatttactcgct
ctttccaaccaagatttttacaagctacagcagcagcgcaaaaggtatcatacacttact
gactttcccgaaggaggcacaactgaactactggctacccatattgctaataaatggcag
atggggagtatactctccctctcagttcccctatcccagcataccaatgcatacattgat
cttttcgcccaaaagaaacaggcctatagcacagagcagcttaccttaatggaaaggctt
gtggacacgttggccctggccctggatcggcagctcgcccaaatagagatagcccggcta
aatgaccaattgcgtcaggaaaatgagtacttgttggaagaggtcacccgtaagtaccac
ttcagtgagattatcggtcagagcgatagcttacaacgcatgttccgccagattgagcag
gtcgcttctacggatgccacggtgctggtgcagggcgagaccggcacgggcaaggagttg
gtcgctcgggccatccaccaagcctcgccccgtagccagcacctgctggtgaagatcaac
tgcgcggccatccctgagtctctctttgaaagtgagttgtttggccacgagaagggagcc
tttaccggggcgatgcagcagcggattggaaagtttgagttggcgcaccggggcacggtt
tttctggacgaaattggagagctgccgctcagcatgcaagccaagctgctgcgggtgctg
caagagcaggagtttgaacgggtggggggcaacatccctatcaaatcggattttcgggta
gtcgcggcgactaaccgaaccctgctcgagtcagtcgcaaccggtaagtttcgggctgac
ctttactatcgcctcagtacctttccgattggtttgacgcccttgcgcgagcggccggaa
gatattccgttgctggctgagcactttgcccggcagtacagtcgccatatcgggcagcca
taccggggcttcaccaagggggcaatgcgcacgctgaagcatggtgactttccgggcaat
gtccgtgaactgcgcaacatagtcgagcacgcggtgattgtcgccagcggtcgcaaaatc
gatggggtgctttctaagatgatacccagcgcgaagccggtgctatccggagcatctccg
ctacccccttctgaccagatcacggaagcttacatcagtgagcagaaggatgcgctggaa
cggcaggcactgctcaaggtgctggaagctacccattggcgtgttcgtggaaaaaaaggg
gctgctcaaatgatcggactcaacccttctacgctggaatcgcggatgaagaagctgggc
atcgagcggtga
DBGET
integrated database retrieval system
