Tunicatimonas pelagia: P0M28_09350
Help
Entry
P0M28_09350 CDS
T09207
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpel
Tunicatimonas pelagia
Pathway
tpel03420
Nucleotide excision repair
tpel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P0M28_09350
03430 Mismatch repair
P0M28_09350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpel03400
]
P0M28_09350
Enzymes [BR:
tpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P0M28_09350
DNA repair and recombination proteins [BR:
tpel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P0M28_09350
MMR (mismatch excision repair)
Other MMR factors
P0M28_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
ResIII
AAA_11
Patatin
TCAD7
Motif
Other DBs
NCBI-ProteinID:
WKN45166
LinkDB
All DBs
Position
2228237..2230489
Genome browser
AA seq
750 aa
AA seq
DB search
MDYLDSLNEPQREAVINTEGPSLIIAGAGSGKTRVLTYRIAYLIQKKGIDPFSILSLTFT
NKAAKEMRDRIERVVGTEARNLWMGTFHSVFARILRAEASKLGYHSNFTIYDTDDSKTLI
KNILKEVGLDDKVYKPNVVFNRISSAKNRLVSWRAYQDNPSIRAEDEAAAKPQMAKLYRL
YVERCFKSDAMDFDDLLFNTNVLFREHLDVLNKYQQRFRYVLVDEFQDTNVSQYLITKKL
AAVRRNISVVGDDAQSIYAFRGADIQNILNFQKDFSEAQVFKLEQNYRSTQNIINAANSV
IARNKAQLKKHIWTANDTGDLVEVIKATSDQEEGRLVAYSIFETKSNENARYRDFVILYR
TNSQSRAMEEALRKRNIKYKVVGGLSFYQRKEIKDLIAYMRYAINSNDEQAFRRIVNLPK
RGIGSTSVDKVIVTAYENGYNIWDVLQQSGEFFPGRLGNALTQFTDMVKGFRLEVARKDA
FDAASHIAKGSGLLRELYEDKTVEGLSRYENVQELLNAIKEFVDDPEVEDKSLNAFLQEV
ALLTSSDQDKDDDPDKVTLMTIHMAKGLEFPYVYVVGMEEDLFPSQMMLASRQDLEEERR
LFYVAITRSMKKLTLSYALTRYRFGRLKNCEPSRFLEEIDPAYMMVNKELGSRSPVGDTK
HARVLLNSIQRDRQRTSTQQKSNYKASPDFAPSDTSQLTSGMKVEHPKFGFGRVDNIDHQ
GANRKAKVIFDDFGEKTLLLSFAKLKIHEE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggattatttagacagtttgaacgaaccgcaacgcgaggcggtcattaataccgaaggg
ccgagcctcattattgccggggccggctcgggaaagactcgcgtacttacttaccgcatt
gcctatctgattcaaaagaaagggatagatccgttcagtattctgtcgctaaccttcact
aataaagcggctaaagaaatgcgcgaccgcattgagcgcgtggtaggcacggaagcccgc
aacctctggatgggcacctttcactccgtatttgcccgtattttgcgagccgaagcaagc
aagttaggttaccacagcaactttacgatttacgataccgacgactctaaaaccctcatc
aaaaatattcttaaagaagtaggactggatgataaggtgtataaaccgaacgtggtgttt
aaccgaatttccagtgctaagaatcgtttagtttcttggcgggcttatcaggacaatcct
tctattcgggcggaagatgaggcggcggctaaaccccaaatggcgaagctctaccggctg
tacgtggagcgttgctttaagtcggatgcgatggactttgacgacctgctctttaatacc
aacgtgctgtttcgcgagcatctggatgtgctaaacaagtatcaacagcgctttcgctac
gtactagtagatgagtttcaggataccaacgtttcccagtatttgattaccaagaagcta
gccgcggttcgtcgtaatatttcggtggtgggagatgatgcccagagcatctacgctttt
cgaggagcggatattcagaacattctcaattttcagaaagacttttctgaggctcaagta
tttaagctggaacaaaactaccgttctacccaaaacattatcaacgcggctaactcagtc
attgcccgcaacaaagcccagctcaagaagcacatctggacagctaacgataccggcgac
ttagtagaggtgattaaagctacttccgatcaggaggaaggacgactcgtagcctattct
attttcgagacaaagagcaatgagaatgcccgctaccgcgattttgtgattctgtaccgc
accaacagccagtcgcgggcaatggaagaagccctccgcaaacgaaatatcaagtataaa
gtagtaggcggactttcgttctaccagcgcaaagaaattaaagacctaatcgcctacatg
cgctacgccatcaactctaatgatgagcaagccttccgacgcattgtgaacctacccaag
cgaggcattggctccacgtcggtggataaagtgattgtaacggcctacgaaaacggttac
aacatctgggatgtactgcaacaatcgggtgaattttttcccggtcggctgggcaacgct
ttaacccaatttaccgatatggttaagggctttcggttagaagtagcccgaaaagatgct
ttcgatgctgcttcccatatcgccaagggttcgggactgctgcgagagttgtacgaagat
aagacggtagaaggcttaagccgctacgagaacgtacaggaattactgaacgccattaag
gagtttgtggatgaccctgaagtggaagacaaaagtttgaacgcctttctacaggaggta
gccctactcacgtcttccgatcaggacaaagatgatgatccggataaagtaacgctgatg
accatccacatggctaagggcttagagtttccttacgtatatgtggtggggatggaagaa
gacttgtttccttcgcagatgatgctggccagtcggcaggacctggaagaagaacggcgc
ctgttttacgtggccattacccgatccatgaaaaagctaacgctatcctacgccctcacc
cgctatcgcttcggtcggttgaaaaactgcgaacccagtcgctttttagaagagattgat
ccggcctacatgatggtaaacaaagagttgggttctcgctcgcccgtaggggacaccaag
cacgcccgcgtactgctcaacagcattcagcgcgatcggcaaagaacatctacccaacag
aaaagtaattacaaagcctcacctgactttgcccctagcgatactagtcagctcacatcg
ggcatgaaagtagagcaccctaagttcggatttggccgggtagataatatcgatcatcaa
ggtgccaaccgaaaggctaaagttatttttgatgattttggcgaaaaaacattattactt
agttttgccaaactgaagattcacgaagagtag
DBGET
integrated database retrieval system
