Tunicatimonas pelagia: P0M28_15320
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Entry
P0M28_15320 CDS
T09207
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tpel
Tunicatimonas pelagia
Pathway
tpel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P0M28_15320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpel03400
]
P0M28_15320
Enzymes [BR:
tpel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
P0M28_15320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P0M28_15320
DNA repair and recombination proteins [BR:
tpel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P0M28_15320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WKN40413
LinkDB
All DBs
Position
complement(3590507..3591292)
Genome browser
AA seq
261 aa
AA seq
DB search
MPELPEVATYQKFFDMAATGRKVTDVEVAEPRVVTVSPEELQQSVVGQRWEETQRIGKHL
LVKLSDGGWMTIHFGMTGSLRSFKDREDAPRFTKVLFALDDGFFLAFRCPRILGRVGLTE
SLSAYQKDKKLGPDALTVSWEEFQEILDGRTGLIKPLLMHQSAVAGLGNWIVDDILYQAG
IHPERRANELSEAERKAIFNKMKYILKTAVELESRYEDFPDEFLVTYRWSKNQHRQEEIN
LEILKVGGRSTYIDAKRQKRL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacccgaagtagccacctatcagaagttttttgatatggctgccactggc
cggaaagtaactgatgtagaagtggctgaaccccgagtggtcactgtttcccccgaagaa
ttgcagcaatcggtagtaggccaacgctgggaagaaacccagcgcattggtaaacatctg
ctggtaaaactaagcgatgggggctggatgactattcactttggtatgaccggttcatta
cgctcctttaaagatcgggaagatgccccaagatttaccaaagtactctttgcgttagat
gatggtttttttctagcgttccgctgcccgcgcattttaggtcgggttgggctaactgag
agtttatctgcctaccagaaagataagaaactagggccggatgcactcaccgtttcttgg
gaagagtttcaggaaatactagacgggcgaaccggactaatcaagcccttgctaatgcac
caaagtgccgtagcgggtttaggcaactggattgtagatgacattctgtaccaggctgga
attcaccccgaacgacgcgccaacgaattaagcgaagccgagcggaaagcaatcttcaat
aaaatgaagtacattctgaaaacggcagtagaactagagtcccgttatgaggattttcct
gatgagtttctggtaacctaccgctggtctaaaaaccaacaccgccaggaagagattaat
ctagagatactaaaagtagggggacgaagcacctatattgatgccaagcgtcagaaacga
ttgtag
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integrated database retrieval system
