Tunicatimonas pelagia: P0M28_24910
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Entry
P0M28_24910 CDS
T09207
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpel
Tunicatimonas pelagia
Pathway
tpel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P0M28_24910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpel03021
]
P0M28_24910
03400 DNA repair and recombination proteins [BR:
tpel03400
]
P0M28_24910
Enzymes [BR:
tpel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P0M28_24910
Transcription machinery [BR:
tpel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P0M28_24910
DNA repair and recombination proteins [BR:
tpel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P0M28_24910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
LBP_M
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WKN42279
LinkDB
All DBs
Position
5805061..5806053
Genome browser
AA seq
330 aa
AA seq
DB search
MSILAFQMPEKVVMEKADNFHGLFTFKPLERGYAVTIGNALRRILLSSLEGYAITGIKIP
GVLHEFSSIDGVVEDLSEIILNLKMVRFKKVTEDFVENKVVIPLRGQSTFTGADIQNHTT
SFEILNPEHVIAHLDDSVDLEVELYVDKGRGYIPSEENSQNDQNAGYIPLDAVFSPIKNV
TFEVENTRVEQKTDFEQLLIDIQTDGSIHPEDALKGAANILIKHFMLFSDQSMVLESPQQ
GEPDAVDEEMLHMRKLLKTPLNDLDLSVRAYNCLKAADVKTLGDLAQLEISDMMKFRNFG
KKSLAELEQLIQDKNLSFGMDLTKYKLEED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtccatacttgcatttcaaatgcccgaaaaagtggtgatggaaaaggctgataatttt
cacggcctttttacttttaagccactggagcgagggtacgcagttacgataggtaatgca
ttacgaaggattcttctttcctctttggaaggatacgccatcacgggtattaaaattccg
ggcgtgttacacgagttttcttctattgacggtgtagtagaagatctttcggaaattatc
ttgaaccttaagatggttcgctttaagaaagtaactgaagattttgttgaaaataaagtc
gtaatccctttgcggggacaaagcacttttactggtgctgatattcaaaatcacaccact
tctttcgagattcttaatccagaacacgtaatcgcccacttagatgattccgtagatttg
gaggtagaactgtacgtggacaaaggaagaggatatattcctagcgaagagaatagccaa
aacgatcagaatgctggatatattccgctagatgccgtattctcgcctattaaaaatgtt
acgtttgaagtggagaatactcgggttgagcagaagactgactttgaacagttactgatt
gacattcaaaccgatggttcaatccacccggaagatgcgttgaaaggtgctgccaatatt
cttatcaagcacttcatgctattctctgaccaaagtatggtgctggagtcgcctcagcaa
ggtgaacctgatgcagtagatgaagagatgcttcacatgcgtaagcttcttaaaacccca
ctgaatgatctagatctttcagtgcgggcttacaattgcttgaaagctgctgatgtgaaa
acgctaggcgatttggctcagttagaaatatcagatatgatgaagtttcgaaactttgga
aagaagtccctggcggagctagagcagctcattcaagacaagaatctttcgttcggaatg
gatttaacaaaatacaagttagaagaagattaa
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