Thermococcus peptonophilus: A0127_01880
Help
Entry
A0127_01880 CDS
T04728
Name
(GenBank) RNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
tpep
Thermococcus peptonophilus
Brite
KEGG Orthology (KO) [BR:
tpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpep03019
]
A0127_01880
Messenger RNA biogenesis [BR:
tpep03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
A0127_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
ATPase
Motif
Other DBs
NCBI-ProteinID:
AMQ18006
UniProt:
A0A142CTA4
LinkDB
All DBs
Position
371692..374190
Genome browser
AA seq
832 aa
AA seq
DB search
MLFVVRPGRKKNELEAFFIENEPEKLSQMQNLKADRIYRFIMREGRLFKVLERSQYRNPK
EIEKLLRQSRIVLVNADEWEDYFKRRLQNKRVEKAELCRLCLLEGRITVLTEGNRIKYRN
EYICERCAEDELKRELRFRFKSIAMFDQAKKLLDRFRDLDKVLYAFDPRFDPTKHPEITK
WDELKAKHVKVEKIKIDELPIPEKFKEVLKTEGVNELLPVQSLAVKNGLLEGENLLVVSA
TASGKTLIGELAGVPKAMNGKKLLFLVPLVALANQKYEDFKKRYSKLGLRVAIRVGMSRI
KTKDELVVVDTGIDADIIVGTYEGVDYLLRAGRKIGNVGTIVIDEIHTLDDEERGPRLDG
LIARLRKLYPKAQFIGLSATVGNPEELAKELGLKLVLYDERPVDLERHVIIVRNESEKWR
HIVNLCRAEAMRKSRQGYRGQSIVFTFSRKRTHELAAYLTSKGLKAKPYHSGLPYKQRKL
TEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLTVREFHQMLGRAGRPLYH
EKGKVYLLVEPGRKYSAQMEGTEDEIAFKLLTASIEPVQVEWSDELEQDNVLAHSCVFNR
LDVIEEVQSMCLGANQSAEKVLEKLEGLGFVRIKRPVVEVTPYGRAVSMSFLLPKEATFI
RENLRKREARWIAIKLLPFENLYLSGTLQRELEGAVRGRLSANVFSPSFASILEELDKVI
PELSPNAAERLFTIYQEFFMCPEEDCTEYTMERVSNLIIELRRNGKHPTQIAEHFRKVYG
LIVYPGDVFTWLDGIVRKLEAIERIARVFRVRKTEEEAKMLKKEIEEGRTIR
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgtcgtgagaccgggaaggaagaaaaacgagcttgaggcgtttttcattgaa
aacgagcccgaaaagctctctcaaatgcagaaccttaaagctgatcggatttaccgcttc
ataatgagagaaggcaggcttttcaaagtacttgagagaagtcagtaccggaacccgaag
gaaatagagaagctcctccgtcaatccaggatcgtcctcgtcaacgccgacgagtgggag
gactacttcaagaggaggcttcagaacaagagagttgaaaaggccgagctgtgccgcctc
tgcttgctggagggcaggataaccgtcctgacagagggcaaccgtataaagtaccgcaac
gagtacatctgcgaacgctgtgccgaggacgagctgaagagggagctccgcttccgattc
aagagcatagcaatgtttgatcaggcgaagaagctccttgaccgcttccgtgaccttgat
aaagtcctctacgccttcgacccgcgcttcgatccgacgaagcacccggagataaccaag
tgggacgagctcaaggccaagcacgttaaagtcgagaaaataaaaatcgacgaattacct
atcccagagaagtttaaagaagtcctaaagacagaaggagtaaatgaactcctgcccgtc
cagagccttgcagtcaaaaacggtctccttgagggtgaaaaccttctggtagtctctgca
actgccagcgggaagaccttaataggcgagctggcaggggtaccaaaggcaatgaatggg
aaaaagctcctcttcctggtacctctggtagctttggcgaaccagaagtacgaagacttc
aagaagcgctattccaagcttggcctgagggtggcgataagggtcggcatgagcaggata
aagaccaaggatgagctcgtggtcgttgacacagggatagacgccgatataatcgtcgga
acatacgaaggtgtagactaccttctccgcgcagggcgaaagataggaaacgtcggaacc
atagtgatagacgagatacacacgctcgacgatgaggagcgcggaccgagacttgacggc
cttatagcgagattgagaaagctctacccaaaggcccagttcataggcctctccgcaaca
gtcggcaacccagaggagcttgcaaaggagcttgggctaaaactggtgctctacgacgag
aggcccgttgaccttgagagacacgtgataatagttagaaacgagagcgagaagtggagg
catatagtgaacctctgcagggcagaggcaatgaggaagtcaaggcagggctacagggga
cagagtattgtctttacattctccaggaagagaacgcacgaattagcggcttacctgacg
agcaaaggactcaaagccaagccctatcattccggccttccgtacaagcagagaaagctc
accgagatggagtttctggctcaaaggcttgatgttgtggttacgacggcggcacttgga
gctggcgtggactttcccgcttcccaggtcatctttgagagccttgccatgggcaacaag
tggctaaccgttagggagttccaccagatgctagggagagccggaaggccgctctaccac
gagaaggggaaggtctatcttctcgtcgaacccggaaggaagtattccgcccagatggaa
ggaactgaagatgaaatcgccttcaagcttctgacggcctctatcgagccagttcaggtg
gagtggagcgacgagcttgagcaggacaacgtcttagctcactcctgcgtcttcaatcgg
ctggacgtcatcgaggaagtccaatctatgtgcttaggagctaatcagagcgccgaaaaa
gtccttgaaaagctcgaggggttaggcttcgtgaggataaagagaccggtcgttgaagtt
actccctacggaagggccgtcagcatgagcttcctcctgccaaaggaggcaaccttcatc
agggaaaacctcaggaaaagggaagctagatggatagcgatcaagctcctcccgttcgag
aacctctacctcagcgggactctccagagagagcttgaaggggctgttaggggtcgttta
agcgcaaacgtcttctctccgagttttgcctcaatccttgaagaacttgataaggttatt
cccgagctgagtcccaacgcagcggagaggctgttcacgatctaccaggagttcttcatg
tgtccagaggaggattgcaccgagtacactatggagagggtgagcaacctgataatcgag
cttagaaggaacggaaagcacccgacccagatagcggagcacttcagaaaggtctacggc
ctcatagtctatcctggagatgtcttcacgtggctcgacggcatcgttaggaagctcgag
gctattgagaggatagcgagggtcttccgggtgagaaagaccgaggaagaggcaaagatg
ctgaagaaggagatagaggaagggaggacgatacgctaa
DBGET
integrated database retrieval system
