Thermococcus peptonophilus: A0127_03940
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Entry
A0127_03940 CDS
T04728
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tpep
Thermococcus peptonophilus
Pathway
tpep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A0127_03940 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpep03021
]
A0127_03940 (tfb)
Transcription machinery [BR:
tpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A0127_03940 (tfb)
Prokaryotic type
Archaeal type
TFB
A0127_03940 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_N
Zn_ribbon_IS1595
HTH_Tnp_ISL3
HTH_AsnC-type
Zn_ribbon_3
zf-ChsH2
Zn_ribbon_tTFIIB
FYDLN_acid
Zn_ribbon_LysW
ADK_lid
FtrD-like
Cyclin_C
Cas12f1-like_TNB
Zn_Ribbon_Prim
Auto_anti-p27
Ribosomal_S27e
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AMQ19508
UniProt:
A0A142CXK6
LinkDB
All DBs
Position
complement(739741..740652)
Genome browser
AA seq
303 aa
AA seq
DB search
MSPRRVCPVCGSTEFIYDPRRGEIVCAKCGYVIEENVVDEGPEWRAFEPGQREKRARTGA
PMTLMIHDKGLSTDIDWRDKDIHGNQITGMYRTKLRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQLRLPRHLKEVAASLYRKAVMKKLIRGRSIEGMVSAALYAACRMEGIPRTLDE
IASVSKVSKKEIGRSYRFMARGLGLNLRPTSPIEYVDRFGDALGVSARTKKRAKEILNEA
IKRGITSGKGPTGLAAAALYIAALLEGEKKTQREVAEVAHVTEVTVRNRYKELVEKLGIN
VPI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
attagcccgaggagagtatgcccagtttgcggttcgaccgagtttatatacgaccctcgt
aggggagagatagtctgtgccaagtgcggctacgtaattgaggagaacgtggttgatgag
gggccggagtggagagcgttcgagccgggtcagagggaaaagcgtgccagaactggggca
cccatgaccctgatgatccacgacaaaggtctttccaccgacatagactggcgcgacaag
gacattcacggcaaccagataaccggtatgtaccggacaaagctcagaaggctccgtatg
tggcagaggaggatgcgcatcaacgacgccgccgagagaaaccttgccttcgccctcagc
gagcttgacaggatggccgcccagctccgcctgccgaggcatctcaaggaagtcgccgct
tccctctacaggaaggcggtcatgaagaagctcatccgcggccgttcaatagagggtatg
gtctccgctgcactctacgccgcctgcaggatggaaggcattccgagaacgctggatgag
atagcgtctgtatccaaggtctcaaagaaggaaatcggtaggagctaccgctttatggcc
agggggttaggtttgaacctcaggccaaccagcccaatagagtacgttgaccgctttggc
gacgcccttggagtgagtgccaggaccaagaagagggccaaggaaatcctgaacgaggct
ataaagcgcgggataacaagcggtaagggcccaacgggtctcgccgcggcggccctctac
atagcggctctccttgagggcgaaaagaagacccaaagggaagtcgctgaagttgctcac
gtaaccgaagtaaccgtcaggaaccgctataaggagctcgttgaaaagctcggcataaac
gtcccgatatga
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