Thermococcus peptonophilus: A0127_04285
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Entry
A0127_04285 CDS
T04728
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tpep
Thermococcus peptonophilus
Brite
KEGG Orthology (KO) [BR:
tpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpep03016
]
A0127_04285
Enzymes [BR:
tpep01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
A0127_04285
Transfer RNA biogenesis [BR:
tpep03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
A0127_04285
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
AMQ19511
UniProt:
A0A142CXK9
LinkDB
All DBs
Position
complement(799362..799868)
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AA seq
168 aa
AA seq
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MIIFYLSGDRVFSTDQNAINGLYNKRYFGKVVEGKLFLSLLEAAYLVERGKIEVRDGKRK
LSLEEIMNLGRARDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMEEHSEWLVW
VVPENSRLSPNDITARVRVAHGVRKNMIMAIVDEDADVTYYKVEWVKF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgataatcttctacctgagcggcgatagggtcttctcaaccgatcagaacgcgataaac
gggctctacaacaagcgatactttggaaaggtcgtggagggtaagctgttcctgtcgctc
cttgaggcggcgtacctcgtcgagcgcggcaagattgaggtcagggacggcaagaggaag
ctctcgcttgaggagataatgaaccttggcagggcaagggatgagctttttgacgctaag
taccttgtctacaaagacctgagggacaggggctacaccgtgaagtcgggcctgaagttc
ggctcccatttccgagtttatcggaggggaatggaggagcactccgagtggctcgtctgg
gttgtccccgagaactccaggttaagtccaaacgacataaccgctcgcgtcagggtggct
cacggcgtgaggaagaacatgataatggcgatagttgacgaggacgctgacgtgacctac
tacaaggtcgagtgggtgaagttctag
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