Treponema peruense: IWA51_05000
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Entry
IWA51_05000 CDS
T07715
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tper
Treponema peruense
Pathway
tper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IWA51_05000 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tper03021
]
IWA51_05000 (rho)
03019 Messenger RNA biogenesis [BR:
tper03019
]
IWA51_05000 (rho)
Transcription machinery [BR:
tper03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IWA51_05000 (rho)
Messenger RNA biogenesis [BR:
tper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IWA51_05000 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
NACHT
AAA
AAA_22
OB_RNB
Spore_III_AA
ResIII
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QQA01957
UniProt:
A0A7T3RF25
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All DBs
Position
1097317..1099101
Genome browser
AA seq
594 aa
AA seq
DB search
MAFIKRRGTDSSDDGQQDFFEESDVHSEEEQSVQSASENEKTLTAEESEEKATPKPRRKR
VVKAKAVSETGSDESVQAASSEPAAAETETSAETSSSETNTASEQTEFGTQYQSRPRYDG
SQSRRWNNNRYVSNRRYNNRGGNYERNLQSRLEAVQAAQRIENPEEYESKPRLLINDLTK
MSMPELRNLGVQQGISADDMAPMKKQDLIFSILRAHTEHGGIIFASGALEILPDGYGFLR
SPQNSYLPGPDDIYISPSQIRLFNLKTGDTIYGQTRSPKEGERFFALLRIETVNFDDPCV
AQTRIPFENLTPLYPNEKLRLETVSTELSTRIVDLFVPIGKGQRLLIVAPPKAGKTILMQ
KIANAITKNNPNVYLIVLLIDERPEEVTEMERSIKAEVISSTFDEQATRHVQVAEMVLEK
AKRLVEHKRDVVIFLDSITRLARAYNQTVPTSGKVLSGGVDANALHKPKRFFGAARNVEE
GGSLTIISTSLIETGSRMDEVIFEEFKGTGNSEIDLDRKLAERRLFPAINIKKSGTRKEE
LLLTENELQKMWILRKVLNPMEDADILELIMDKMRKTKDNEAFLASMNPGSAAE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcatttatcaaacgccggggaacagattcgtcggatgacggtcagcaggattttttt
gaagagtccgatgttcattcagaagaggagcagtctgttcaatctgcttctgaaaacgaa
aaaactttgacagcagaagaaagtgaagaaaaagctacgccgaagccaagaagaaaaaga
gtcgttaaggcaaaggctgtttcagagaccggttctgacgaaagtgtacaggctgcatct
tcagaacctgcagcagcagaaacagaaacctctgcagaaacttcttcttcagaaacaaat
actgcttcggaacagacagagttcggcacgcagtaccagagcagacctcgctatgacggc
agtcagagccgccgctggaacaacaaccgctatgtaagcaaccgccgttacaataatcgt
ggcggcaattacgaaagaaaccttcagtcaaggcttgaagctgttcaggctgcacaacgc
atagaaaatcctgaagaatatgagtcaaagccccgtcttcttataaatgatctgacaaaa
atgagtatgccggaactcagaaatcttggtgtacagcagggaatcagtgcagatgacatg
gctcctatgaaaaaacaggatcttattttttctattctgcgcgcacatacagaacacggc
ggtattatttttgcaagcggtgctcttgaaattctgcccgacggatacggattcctcaga
agtccgcagaattcatatcttcctggccctgatgatatttatatttcaccaagccagata
aggctgttcaacctcaagacaggtgatacaatctatggtcagacaagaagtcccaaggaa
ggtgagcgcttttttgcacttttaagaatagagacagtcaattttgatgatccgtgtgtt
gcccagacgcgaattccgtttgaaaaccttacaccgctttatccgaatgaaaaacttcgt
ctagaaacggtttcaacggaactcagtaccagaatagttgatctttttgttccgattgga
aaaggccagcgtcttctgattgttgctccaccaaaggccggtaagacgattcttatgcag
aaaattgccaacgccattacaaaaaacaatccgaatgtttacctgattgttcttttgatt
gatgagcgccctgaagaagttacagaaatggaacgttcaatcaaggcagaagttatttct
tctacttttgacgagcaggctacaagacatgttcaggttgcagaaatggttcttgaaaag
gcaaagcgtcttgttgaacacaagcgtgatgttgtgattttccttgattcaattacaagg
cttgcacgtgcctataaccagactgttcctacttcaggaaaggttttgagcggtggtgtt
gatgcaaatgcccttcataaaccaaaaagattttttggtgccgcaagaaatgtagaagag
ggcggttcacttaccattatttccacatctcttatcgaaaccggaagccgcatggacgag
gttatttttgaagaattcaagggtacgggaaacagtgaaattgatcttgacagaaagctt
gccgagcgccgcctgttccctgcgataaatatcaaaaagtcgggaacacgcaaagaggaa
ctccttcttactgaaaatgaactccagaagatgtggattctgcgcaaggtactcaatcct
atggaagatgccgatattcttgaacttattatggacaagatgcgtaagacaaaggataat
gaagccttccttgcctcgatgaaccccggttccgctgctgaataa
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