Treponema peruense: IWA51_05885
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Entry
IWA51_05885 CDS
T07715
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tper
Treponema peruense
Pathway
tper03410
Base excision repair
tper03430
Mismatch repair
tper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IWA51_05885 (recJ)
03430 Mismatch repair
IWA51_05885 (recJ)
03440 Homologous recombination
IWA51_05885 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tper03400
]
IWA51_05885 (recJ)
DNA repair and recombination proteins [BR:
tper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IWA51_05885 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IWA51_05885 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IWA51_05885 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF3048
MoeA_N
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QQA02104
UniProt:
A0A7T3RFI8
LinkDB
All DBs
Position
complement(1292452..1294587)
Genome browser
AA seq
711 aa
AA seq
DB search
MSEWFKKQISKTQVESVSKKYSLDPITASIMVRRGITSGSDILYYIEDDLRFQHSPFMFA
AMEDAVDRILDAKEENEKVLIFGDRDVDGVTSTTVLYDCLSSMGIDVSYKLPGGDDAYGL
SIQAVEEFAANYGSLIITVDCGISNNAEIAKAAELGLDVIVVDHHNAPETLPSPAIIIDP
KTENSGYPFPDISGCAVVYKLVSAIRFSQSSWYKQDVTLLNVNKENSAVECVKVRNLVPV
SRLTQTIDQNTASLSDTNLPSYLQGQLLLAWDAKTLSQDLQSLFGDGAQFNLVDIREEAA
KLFPKFASMTLTQLKGMSKMAKYGDHEPTEIGGFYNIFVTWVQKSLAKDFPSFAKAEEKD
LQLVALAALADIMPMKNENRIFVKNGLKSINSGRIRPGLRELMAELNLTGKRINSIDLSW
VVVAHLNAAGRLGQPELAAKLFITDSQNERLETAKQIIELNAERKQLCVDAWNYAGIQAK
ASIPLHSNKLCVVIDERINRGVSGILAGRLVSTYNVPAMTVTIVDGIAIGSMRSCRDYDV
TQFLNKMDDLFINHGGHNFAAGFSFKRERLAEFEERIKTLSSEIKLGDTKDTGGDIDAEI
PAQYLTPALLDISDRFEPYGEENPQLLFMAKNIRVASGQRMGKGEKMHLKITVDCGKYKW
PCIFWNEGERLGRDFNVGDRVDFIFRVERNVFNRIETPQINLVDIKKSDNL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaatggttcaaaaaacaaatttcaaaaactcaggtagaatctgtttctaaaaaa
tattcacttgaccccatcactgcaagcataatggtcagaaggggaataacgagcggcagc
gatattctctattatatagaagacgatttgcggtttcagcacagtccctttatgtttgcc
gccatggaagatgccgtagacagaattcttgacgcaaaggaagaaaacgaaaaggtgctt
atctttggagacagagacgtagacggcgttacttctactactgttttgtacgactgtctt
tcttctatgggaattgatgtttcgtacaaactgccgggcggcgatgatgcttacggactt
tcaatacaggctgtagaagaatttgcggcaaattacggttcgctcattattaccgtggac
tgcggaatctcgaacaacgcagaaattgcaaaagctgcagaacttggactggacgtaatt
gttgttgaccatcacaatgctccagagacactgccctcaccggccataatcattgatcca
aagacagaaaattcaggctacccgttccccgacatttcgggctgcgcggttgtatataaa
cttgtaagcgcaatccgctttagccaaagcagttggtacaagcaggacgtaacccttctt
aacgtaaataaagaaaattctgccgtagaatgcgtcaaagtgcgcaatcttgttccggta
agccgccttacacaaaccattgaccaaaacacggcttctctttctgacacaaatcttcct
tcctatttgcaggggcagcttcttctggcatgggatgcaaaaactttgtcacaggatttg
cagtctctttttggtgacggtgcgcagttcaacctggtagacataagggaagaggcggct
aaactttttccaaaatttgcgtcaatgacacttacccagcttaagggcatgtcaaaaatg
gcaaagtacggcgaccacgagccaacagaaataggcggtttttacaatatttttgtaaca
tgggtacagaagtcgcttgcaaaagactttccttcctttgcaaaggccgaagaaaaagat
ctgcagcttgtggcactggcggctcttgcagacattatgcctatgaaaaacgaaaacaga
atcttcgtaaaaaacggcctcaagtcaatcaattcgggaagaataagaccgggtctgcgt
gaacttatggcagaactcaatcttaccggcaaacgcattaattcaattgacttaagctgg
gttgttgtagcacaccttaacgcagcaggaagacttggccagccggaacttgcggcaaaa
ctttttattacagacagtcagaatgaacgcctcgaaaccgcaaaacagattattgaactt
aacgcagaacgcaagcagctttgtgtagacgcgtggaactatgccggcattcaggcaaaa
gcgtcaatcccacttcacagcaacaaactttgtgtcgtaatagatgaaagaataaacagg
ggcgtaagcggaattcttgcaggacgtcttgtttctacatacaatgttcctgccatgacc
gttactattgtagacggaattgcaatcggttcaatgagaagctgccgagattatgatgta
acgcagtttcttaacaaaatggacgatctatttataaatcacggcgggcacaattttgca
gcaggattcagctttaaaagggaacggcttgcagaattcgaagaaagaataaaaaccctt
tcttcagaaattaaactcggtgacacaaaagatactggcggcgacatagatgcagaaatt
ccggcccaataccttacacctgcccttcttgatatttctgacagattcgagccgtacggt
gaagaaaaccctcagctgctttttatggcaaaaaacataagggttgcttcgggccagcgc
atgggaaaaggcgaaaaaatgcatctgaaaattacagtcgactgcggcaaatacaaatgg
ccgtgcatcttctggaacgaaggcgagcggcttggaagggactttaacgttggcgacagg
gttgactttatttttagggtcgaacgcaatgtgttcaacagaatagaaactccgcagata
aatcttgtggatattaaaaaaagtgacaatctctaa
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