Treponema peruense: IWA51_11815
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Entry
IWA51_11815 CDS
T07715
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tper
Treponema peruense
Pathway
tper03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tper00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IWA51_11815 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tper03021
]
IWA51_11815 (rpoC)
03400 DNA repair and recombination proteins [BR:
tper03400
]
IWA51_11815 (rpoC)
Enzymes [BR:
tper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IWA51_11815 (rpoC)
Transcription machinery [BR:
tper03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IWA51_11815 (rpoC)
DNA repair and recombination proteins [BR:
tper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IWA51_11815 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QQA00922
UniProt:
A0A7T3RD50
LinkDB
All DBs
Position
complement(2557334..2561815)
Genome browser
AA seq
1493 aa
AA seq
DB search
MRDIQDFASLKIKLASPDNIRAWSYGEVKKPETINYRTLRPERDGLFCERIFGTTKEWEC
YCGKFKSIRYKGVICDRCGVEVTHFKVRRERTGHIELAAPVSHIWYYHSVPSRMGLLLDL
QVAALRSVLYYEKYIVIDPGDTDLKKNQLLTEDEYMEAQERYGGSFTAGMGAEAIKTLLE
NLDLDALAAELRAKMIEKGPKSDKHLLRRIEIVENFRSSENKASWMILDVVPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLQQLSAPDIIIRNEKRMLQEAVDALFDNSK
RKQRVVKGASSRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLWQCGLPE
KMALELFKPFIMKKLVDKGVVFNIKKAKMLVESESAEVYAILDEVVREHPVMLNRAPTLH
RLGIQAFEPVLVPGKALKLHPLACKAFNADFDGDQMAIHVPLTQAAQMECWTLMLSARNL
LDPANGNTIVYPSQDMVLGIYYMTSIKPNAKGTGKLFSSTDEVRLAAMSGAIEWQAEIKI
HKAVLNKCVSGDKDPDGRYILTSAGRLAFNESMPAEVDYYNELLGDKKLKKMIESVYHNE
QTSDKAVKALIEAKYPFEKLSAEVMDKVMGDALLIKQINKIYNRETPIEENVLRKLIISL
YATDRAWLTIQMLDAIKACGYKNATFYGATLSMDDILVPAEKKAMVDKANKEVEDIVSQW
SRGAITQDERYNRVTEVWERTNEKLTNIMMDNLAKDKDGFNTIYMMATSGARGSKKQISQ
LAAMRGLMQKPNGDIIELPIRANFKEGLSVIEFFISTNGARKGLSDTALKTADAGYMTRR
LVDVAQDVVVNEDDCGTINGIDYTAIKDGDTVVVPLATRIAGHYTIERVLDPVSGELLCD
VNQYIDEALAQKIDKAGVEKVKLRTVLTCESKHGICVKCYGKDLARNKIVEIGEAVGTIA
AQSIGQPGTQLTLRTFHTGGAAEKTTEDNHIAMKYPVYIQSVEGTHVVMDNGNWLFTRRG
SMVVTKLFNKYGFEPSDELLVTDGARVRKDNVIFKHNGEEVKASDNGRIIIRDNTVYLTS
NDQKIEIVNGSIIYSQYVSAGCVADANVPIGEFDPFSEPIIAEVSGYVHFEDIITGSTLL
EKTDPQTGAVERRISDLHLDVKQPRIIITDEDGNEKGSYHLPAGAILLASDKQQVKAGET
LAKIAKEASKANDITLGLPRVSELFEARKPKNPAVISQIAGTVKFGKIVKGKRTVIVEDE
YGKEFNHFVPMTKRLLVRDGDTVEAGEKLSDGSIDAHDVLSVLGEDSLQNFLMDEIQSVY
RAQGVDINDKHIGTIIRQMLKKVEIVSVGDTKFIYGQSVDKYTFHEENERVIEEGGQPAI
ARPMFQGITKAALATDSFISASSFQETTRVLTNAAIAGSIDHLHGLKENVIIGHMIPAGS
GMRQYHNVKLSDSSTADLDAKMEEILEQRRIEKALAAETMDTMSAGMEGNDED
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacattcaggatttcgccagtcttaaaataaagcttgcatcgccggacaatatc
cgtgcatggtcttacggtgaagtaaaaaagcctgagacaataaactatagaacactcaga
ccggagcgtgacggccttttctgtgagcgcattttcggaaccacaaaggaatgggaatgc
tactgcggaaaattcaagagcatccgttacaagggtgttatttgtgaccgctgcggtgtt
gaagttactcactttaaagttcgccgcgagagaacaggacacattgaacttgcagctccg
gtaagccacatctggtattaccattcagttccgagccgcatgggtcttttgcttgatctt
caggttgcagcactccgctcggtactttactacgagaagtatatcgtaattgatccgggc
gatactgaccttaaaaagaaccagcttcttactgaagacgagtacatggaagcccaggaa
cgctacggcggttcatttactgccggcatgggtgcagaagccataaagactttgcttgaa
aaccttgatcttgatgctttggcagcggaacttcgcgcaaagatgatagaaaaggggcca
aagagcgacaagcatcttcttcgccgcatagagattgttgagaacttccgctcttctgaa
aacaaggcatcatggatgattcttgacgttgttcctgtaattccgccggaacttcgtcct
atggttcagcttgacggaggacgttttgcaacttccgacctcaatgacctttaccgccgc
gtaataaacagaaataaccgtctcaagagacttcagcaactttctgccccggatattatt
atccgcaacgaaaagcgcatgcttcaggaagccgtagatgcactctttgacaacagcaag
cgcaagcagcgtgtcgttaagggagcatcaagcagaccgctcaagtcaatcagtgacatg
cttaagggaaagcagggacgcttccgccagaatcttcttggtaagcgtgttgactactca
ggacgttcagttattgttgtaggtccggaacttaagctctggcagtgtggtcttcctgaa
aaaatggcacttgaactttttaagccgtttataatgaagaaacttgtagacaagggtgtt
gtatttaacattaaaaaggcaaaaatgcttgtagaaagcgagtctgccgaagtatatgct
attcttgatgaagttgtacgcgagcatcctgttatgcttaaccgtgctcctacactccac
cgtcttggaattcaggcatttgaacctgttcttgttcccggaaaggcacttaagcttcat
cctcttgcatgtaaggcttttaatgctgacttcgacggtgaccagatggctatccatgtt
cctcttacccaggcggcacagatggaatgctggacactcatgctttctgcaagaaacctt
cttgaccctgcaaacggaaatactattgtttatccttcacaggatatggttcttggaatc
tactatatgacttccattaagccgaacgcaaagggtacaggaaaacttttcagttcaact
gatgaagttcgtcttgctgctatgtccggtgctatcgaatggcaggcagaaatcaagatt
cacaaggctgttctcaataagtgcgtaagcggagacaaagatcctgacggacgctatatt
cttacttcagccggacggcttgcattcaatgagtctatgcctgcagaagttgactattac
aatgaacttcttggcgacaaaaagctcaagaagatgattgaaagcgtttatcacaacgag
cagaccagtgacaaggcagtcaaggctcttatcgaagcaaagtatccgttcgaaaaactt
tctgccgaagtaatggacaaagtaatgggagacgcacttcttattaagcagattaataag
atttacaaccgcgaaactcctatagaagaaaatgttctgcgcaagctgattatcagtctt
tatgcaactgacagggcatggcttacaatccagatgcttgatgcaatcaaagcctgcggt
tacaaaaatgctacgttctacggtgcaacgctctctatggatgacatccttgttccagca
gagaaaaaagctatggttgacaaggccaataaagaagttgaagacatcgttagccagtgg
tcacgcggtgctattacacaggacgaacgctataaccgcgtaactgaagtttgggaaaga
acaaacgaaaagctcaccaacataatgatggacaatcttgccaaggacaaggacggattc
aatactatctacatgatggctacatccggtgcccgtggttccaagaaacagatttcacag
ctggccgcaatgcgcggacttatgcagaaacctaacggagacatcattgaacttcctatc
cgtgcaaactttaaggaaggactttccgttattgaattctttatttctacaaacggtgcc
cgtaagggactttccgatacagctctcaagacagccgatgccggttacatgacacgccgt
cttgttgatgttgcccaggacgttgttgtaaatgaagatgactgcggaacaatcaacggt
attgattacacagcaatcaaggacggagacactgtagttgtgcctcttgctacaagaatt
gccggtcactatacaatcgagcgcgttcttgaccctgtaagcggcgagttgctctgcgat
gttaaccagtacattgacgaggctcttgcccagaagattgacaaggccggtgtagaaaaa
gtaaaactccgcacagttcttacctgcgaaagcaagcatggaatctgtgtaaagtgttac
ggaaaagaccttgcacgcaacaaaattgttgaaatcggtgaagcagtcggaacaatcgct
gcacagtcaatcggacagcctggtactcagcttacccttcgtacattccatacgggagga
gccgccgaaaagacaacagaagacaaccacatcgcaatgaagtatcctgtatatattcag
agcgttgaaggaacacacgttgttatggataacggcaactggctgtttacacgtcgcggt
tcaatggttgtaacaaaactttttaacaagtacggttttgaaccttctgatgaacttctt
gttaccgacggggcacgcgtccgcaaggataatgtaattttcaagcataacggcgaagaa
gtaaaagcttctgacaacggacgcattataatccgcgacaataccgtttatcttacaagt
aatgaccagaagatagagattgtcaacggttcaataatttactcacagtatgtttcagcc
ggatgcgtagccgacgcgaatgttcctattggtgaattcgatccgttcagcgaacctatt
attgctgaagtttcaggatatgttcactttgaggacattattacaggatctactcttctt
gaaaaaacagatccccagacaggagcagttgaacgccgtatcagtgatcttcatcttgac
gtaaagcagccaagaattatcattactgacgaagacggaaacgaaaagggtagttaccac
cttcctgcaggagcaatccttcttgcttcagacaagcagcaggtaaaggcaggagaaact
cttgcaaagattgccaaggaagcaagcaaggctaacgatattaccctcggtcttccgcgc
gtttcagaactctttgaggcccgcaagccaaagaatccggctgttatctcacagatagca
ggaaccgtaaagtttggaaagattgtaaagggtaagagaactgttatcgtagaagatgaa
tacggcaaggaatttaatcactttgttccaatgacaaaacgtcttcttgttcgtgacgga
gatacagtcgaagcaggtgaaaagctcagtgatggttctatcgatgcacacgacgttctg
tctgttttgggtgaagattccctgcagaacttccttatggatgaaattcagtccgtttac
cgtgcacagggtgtagacatcaacgacaagcatatcggaacaattatccgccagatgctt
aagaaagtagaaattgtgtctgtaggagatacaaagtttatctacggccagtcagttgac
aagtacacattccatgaagaaaatgagcgcgttattgaagaaggcggacagcctgccata
gcacgcccgatgttccagggaattacaaaggcagctttggcaactgattcgtttatttct
gcatcttctttccaggagacaacacgtgttcttacaaatgcggcaattgcaggttcaatc
gatcaccttcacggacttaaggaaaacgttattatcggtcatatgattccggccggaagc
ggtatgcgccagtatcataacgttaagctttctgactcttctacggccgaccttgatgcc
aagatggaagagatccttgaacagcgtcgtatagaaaaagcccttgcagccgagacaatg
gacacaatgtctgccggaatggaaggaaacgacgaggactag
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integrated database retrieval system
