Terrisporobacter petrolearius: TPHSE_03140
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Entry
TPHSE_03140 CDS
T10349
Symbol
rlmCD_1
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tpet Terrisporobacter petrolearius
Brite
KEGG Orthology (KO) [BR:
tpet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpet03009
]
TPHSE_03140 (rlmCD_1)
Enzymes [BR:
tpet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
TPHSE_03140 (rlmCD_1)
Ribosome biogenesis [BR:
tpet03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TPHSE_03140 (rlmCD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltransf_15
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
N6_N4_Mtase
RrnaAD
PCMT
Methyltransf_4
DOT1
CMAS
Ubie_methyltran
TPMT
Methyltransf_23
Phage_Cox
Motif
Other DBs
NCBI-ProteinID:
XAM36042
LinkDB
All DBs
Position
270211..271569
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AA seq
452 aa
AA seq
DB search
MLSKDKMYVVEIVDIGQGGVGIGKFEGFTVFVDGGLVKDKIKVKITKSKKNYAVGEIVEI
LEPSPYRVERKCSKELKECGGCQIQELDYKEQLNVKTNEVKQVISRIGKLDDVVIHNALG
MEEPFRYRNKAQFPIQKVDGVPVIGFYKKKSHDIIPTDQCIIQHDVNDKIIKIIKTYIRA
YKVSIYDEKTHTGVLRHLVTKVGFTTKEVMVVLVANGRKLPYLNELASVLKENIPGFKTL
VVNVNRDKTNVILGNENRVIYGDGKINDNIGDLVFEISPLSFFQVNPVQTEVLYNKALEY
ANLGENDTVFDIYCGIGTISLFLAQKAKKVYGIEIVEEAIKDAKINAKINNLDNVEFYVG
KAEEVVPKMYKQGKRANVVVVDPPRKGCDEKVLDTIISMEPDRVVYVSCSPSTLARDLNY
LDERGYKCLEVQPVDMFPHSVHIENVALIVKK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaaaagataaaatgtacgttgtagagatagttgatataggtcaaggcggagtt
ggaattggtaaattcgaaggatttacagtttttgtagatggcggattagtaaaagataag
attaaggttaagataactaaatcaaaaaagaactatgccgttggagaaatagttgaaata
ctggaaccatcaccatatagagttgaaagaaaatgtagcaaagagcttaaagaatgtggt
ggatgtcaaattcaagaattagattacaaagaacaacttaatgtaaaaactaatgaagtt
aaacaagttataagtagaattggaaaacttgatgatgtggtaattcataatgctttaggg
atggaagaaccttttagatatagaaataaggctcaatttcctattcaaaaagtagatgga
gtacctgtaattggtttttataaaaagaagagccatgatattatacctacagaccaatgt
attatacagcacgatgtaaatgataaaataattaaaataattaaaacttatataagagct
tataaagttagtatatatgatgaaaaaactcatacaggagttttaagacatttagtaaca
aaggtaggttttactactaaagaagttatggtagtattagttgctaacggaagaaaattg
ccatacttaaatgaattagcctctgttttaaaagaaaatataccaggatttaaaactttg
gtagttaacgtaaatagagacaaaactaatgtaatattaggaaatgaaaatagagtaatt
tatggagatggaaaaattaatgataatattggagatttagtattcgaaatatcaccatta
tcattcttccaagttaatcctgtacaaacagaagtattatataataaagcattagaatat
gctaatttaggagaaaatgatacagtttttgatatatattgtggaatcggaactatttca
ttattcttagcacagaaagctaaaaaagtatatggaatagaaattgtagaagaagcaata
aaagatgcaaagataaatgcaaagataaataatttagataatgtggaattctatgtggga
aaagctgaagaggttgttccaaaaatgtataaacaaggaaaacgcgctaatgtagttgtt
gttgacccacctagaaagggttgtgatgaaaaggtattagatacaattatatctatggaa
ccggacagagtagtttatgtttcatgtagtccatcaactttagcgagagatttaaattat
ttagatgaaagaggatataaatgtttagaggtacaaccagtagatatgttccctcatagt
gttcatatcgaaaatgtcgctcttatagttaagaaataa
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