Terrisporobacter petrolearius: TPHSE_21190
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Entry
TPHSE_21190 CDS
T10349
Symbol
helD
Name
(GenBank) DNA helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpet Terrisporobacter petrolearius
Pathway
tpet03420
Nucleotide excision repair
tpet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPHSE_21190 (helD)
03430 Mismatch repair
TPHSE_21190 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpet03400
]
TPHSE_21190 (helD)
Enzymes [BR:
tpet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPHSE_21190 (helD)
DNA repair and recombination proteins [BR:
tpet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPHSE_21190 (helD)
MMR (mismatch excision repair)
Other MMR factors
TPHSE_21190 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PhoH
Viral_helicase1
DEAD
SLFN-g3_helicase
ResIII
DUF6392
AAA_16
NPHP3_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
XAM37835
LinkDB
All DBs
Position
complement(2151640..2153877)
Genome browser
AA seq
745 aa
AA seq
DB search
MSINSYEWNLENEWLEKVLKETTKQLDEKREAKNRLQMEAKETQRELWNDLGSVSITNGL
DQISEFVSAMDTMKNQKRSHEFNKKLEEKYEKMLVSPYFGRIDFLEKNELDAEKCYIGLS
NLTDEDFDFLVYDWRAPISSMFYDYEIGAANYECPQGVISGEITSKRQYKINNGKIEYMF
DSNLSIDDEMLQELLSKSSDDKMKGIVTTIQKEQNQVIRNEDYKNLVVQGAAGSGKTSVA
LHRIAYLLYKHRDKITCENIIIFSPNNIFNDYISNVLPQLGEENMYQTTFKDYMHEKLGN
GFKKETPSQMMEYILGCNKNLAYEDRIKNVNFKTSVEFVDILKEYVNHLETNKRHFEDII
VRGKLIISANEIQNLFLKDFANRPIKKRLERIKSRILFLMEPYEDAWRKEIYEELASSGY
YLDKQEMKEKSSETVGKHLKDVYEKISRMTYFNPVSIYRNLFKYSNKSLNKLSYKYDSDF
INHIKTYTMENLNVSNLYYEDQVALLYLKVALGDIPITSQIKYVIIDEAQDYTPLQYEIF
YQLFKSAKMTILGDINQSINSFMNVGSYNNIYNISKDDTCIINLTKTYRSTEEITKFSRK
LLQKNLSDGYVGRHGDEPSVVNFDNEDDMNKELIEEINNYKEKNYESIGIITKTARQTED
LYELLKSNDIDVSSITKDDDSFTNSIVVIPSYLAKGLEFDVVFLYDVSNKNYNSEDERLL
LYTCCTRALHVLNLYYVREVTSLLK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtgagtataaatagttatgaatggaatctagaaaatgaatggttggaaaaagtccttaaa
gagactacaaaacaacttgatgaaaaacgtgaagcaaaaaatagattacaaatggaagca
aaagaaacacaaagagaattatggaatgatttaggatctgtttccataacaaatggattg
gatcaaatttcagagtttgtatcagctatggatactatgaaaaatcaaaaaagaagtcat
gaattcaataaaaaacttgaagaaaagtatgaaaaaatgcttgtatctccttatttcggt
cgaattgactttctcgaaaaaaatgaactagatgctgaaaagtgttatattggattatca
aatcttacagatgaagatttcgattttcttgtgtatgactggagagcacctatttcaagt
atgttttatgactatgaaattggagcggcaaactatgaatgcccacaaggtgtaatatcc
ggagaaataactagtaagcgacaatataaaatcaataatggaaaaattgagtatatgttt
gacagtaatttaagtattgatgatgaaatgttgcaagaactgttaagcaaaagttctgat
gataaaatgaaaggtattgttactactattcaaaaagagcaaaatcaagtaatacgtaat
gaagattataaaaatttagtagttcaaggagctgctggaagtggaaagacttctgtagca
cttcatagaattgcatatttattatataaacatagagataaaataacatgtgaaaatata
atcatattttcaccaaacaatatctttaatgactatatctcaaatgtattacctcaactt
ggtgaagaaaatatgtaccaaaccacatttaaggattatatgcatgaaaaactaggtaat
ggatttaaaaaagaaacaccttcacagatgatggaatatatacttggttgtaataaaaat
ctagcttacgaagatagaattaaaaatgttaactttaaaacctcagttgaatttgttgat
attttaaaagaatatgtaaatcatttggaaacaaataaaagacattttgaagatattatt
gtaaggggaaaattaataatttcagcaaatgaaatacaaaatttatttttaaaagacttt
gctaatagaccaataaagaaaagattagaaagaataaaatcaagaatattattccttatg
gaaccttatgaagatgcttggagaaaagaaatatatgaagagctggcttcttctggatat
tatctagacaagcaggaaatgaaagaaaaaagtagtgaaactgtaggaaaacacttaaaa
gatgtttatgagaagatttcaagaatgacatattttaatcctgttagtatttatagaaat
ctatttaagtattcaaataaatctttaaataaattaagttataaatatgatagtgatttt
ataaatcatataaaaacttacacaatggagaatttaaatgtaagtaatctttactatgaa
gaccaagttgctcttttatacttaaaagttgcacttggcgatattccaattacttcacaa
attaaatatgtaattatagatgaagctcaagactatactccactgcaatatgaaattttt
tatcaacttttcaaatctgcaaaaatgactatacttggagatataaatcagtcaattaat
tcatttatgaatgtgggaagttataataatatttataatatatcaaaggacgatacttgt
ataataaacttaacaaaaacttatcgttcaacagaggaaattactaaattctcaagaaag
cttctacaaaaaaatctaagtgatggatatgtgggaagacatggtgatgagcctagtgtt
gttaattttgacaatgaagatgatatgaataaagaacttattgaagagataaataattac
aaagaaaagaattatgaatctattggtattatcacaaaaacagcccgccaaactgaagat
ttgtatgaattattaaaatcaaatgatatagatgtaagttctataacaaaagatgatgat
agttttaccaatagtatagttgtaataccttcctatctggctaaaggtcttgagtttgat
gtggtatttctatatgatgtaagtaataaaaattataacagtgaagatgaaagattgctt
ctgtatacttgctgcacaagagctcttcatgtattaaatttatattatgtaagagaagtt
acttctttattaaaatag
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