Terrisporobacter petrolearius: TPHSE_25700
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Entry
TPHSE_25700 CDS
T10349
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpet Terrisporobacter petrolearius
Pathway
tpet03420
Nucleotide excision repair
tpet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPHSE_25700 (uvrD1)
03430 Mismatch repair
TPHSE_25700 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpet03400
]
TPHSE_25700 (uvrD1)
Enzymes [BR:
tpet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPHSE_25700 (uvrD1)
DNA repair and recombination proteins [BR:
tpet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPHSE_25700 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
TPHSE_25700 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
ResIII
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XAM38286
LinkDB
All DBs
Position
complement(2569843..2572269)
Genome browser
AA seq
808 aa
AA seq
DB search
MKNVSAKYSIIIYKKEMDTETENDILSYLRHGVTVYLFTNIIVDKSKLKNKAEILEAISN
MFLVLIDTKNDYFEEGIKSVDNELLDKKFYENVCKVKDNEFNSEYYEIVHSPVEDNVLVR
AGAGTGKTTAMINRILYLKHINRYLNLNEIVLITFTNEATIQMREKLIKKIENYYNLTKN
HKYLQWLDEVANMNIKTIHSFARDILEKQGEELGFFENFKITTFKYTRQKLIEKYIEEFK
NSSQGSIYSEFARIPQHQLIKKIIAIMDKLDNFAVDINAINYNVYFGEDKSGFNIMIEFI
IKNVVKELEEIKQQTNSWEMNDLIKKLPNLQFSSQIELNIKVLMVDEFQDTDKIQIDFIS
WIVESSNAKLFVVGDEKQSIYRFRGADYTAFDQLREKYEQISVDSIKDFNLVRNYRTNKS
LLSNIDDWFVNINERVDKFNYEDEDRIYSLKNSEFKNEICIENLEQKSTKTELIKSLLEN
KKDDEEVCILVRTNSDVKEIKELCDKEGIPCEISSTGDFFRSESVRELYIMIKSLINKND
NDSIYSLLNSSYSCMNINKKQLIESIFSDRSKTKEYLKLQLEEIKWDDYLRLSMIKSPIN
LIEEIINEIKPELNYYKKIINKFNELEAKVITTEYKMNLDHCLFLIRKNFNGNVATLSTI
ENYLRINIQTNDIESKKKIGDTYKKNFIKCMTIHKAKGLEYEYIILPITSHEFISHNQDF
DLIIDRDNFENVNIGYKVILGNDYKEVSNNIYLQKKYDENEEIKGEETRLFYVALTRAKK
ELYIHKKSITSSYINSWMTLIPEGEYNV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgtatctgcaaaatactcaataattatttataaaaaagagatggatacagaa
acagaaaatgatattttatcttatttaagacatggggtaaccgtttatttatttactaat
attatagttgataaaagtaagttgaaaaataaagcagaaatattagaggcaattagtaac
atgttcttagtattaattgatactaaaaatgattattttgaagagggtattaaatcagtt
gataatgaattactagataagaagttctatgaaaatgtttgcaaagtgaaggataatgag
tttaatagtgaatattatgaaatagtgcattctcctgtagaggacaatgtattggtaagg
gctggtgcgggcacaggcaaaacaacagcaatgataaatagaatattatatttaaaacat
attaataggtatttaaatttaaatgaaattgtattaataacatttactaatgaagcaacg
atacaaatgagagaaaaattaataaaaaagatagaaaattactataatctaactaagaat
cataagtatctccaatggttagatgaggttgctaatatgaatatcaaaacaatacattca
tttgctagagatattttggaaaaacaaggtgaagagttaggattttttgaaaattttaaa
ataacaacatttaagtatacaagacaaaagcttattgaaaaatatatagaagaatttaaa
aattcatcacaaggaagtatttactctgaatttgcaagaataccacaacatcaacttatt
aaaaaaataatcgctataatggataagttagataactttgcagtagatataaatgctata
aattataatgtttattttggcgaggataaatctggatttaatattatgatagaatttatc
attaaaaatgtagtaaaagaattggaagaaataaaacagcaaactaattcgtgggaaatg
aatgacttgattaaaaaactacctaatttacaatttagctcacaaatagagttaaatatt
aaagtactgatggtagatgaattccaagatactgataaaatacaaatagatttcatttct
tggatagtagaaagctccaatgcaaaattgtttgttgtaggagacgaaaaacagagtata
tatagatttagaggtgcagattatacagcatttgatcaattaagagaaaaatatgaacaa
atttcagttgatagtataaaagattttaatttggttagaaattatagaacaaataagagt
ttacttagcaatatagacgattggtttgtgaatattaatgaaagggtagataagtttaac
tatgaagatgaagataggatctattctttaaaaaatagtgagtttaaaaatgaaatatgt
atagaaaatttagaacaaaagtctacaaaaactgagttaataaaaagtttattagaaaac
aaaaaagatgatgaagaagtttgtatattagtaagaactaactcagatgttaaagaaata
aaagaattatgtgataaagaaggtattccatgtgaaatttcttccacaggtgattttttt
agaagtgagtcagttagagaattgtatataatgataaaatcattgattaataaaaatgat
aacgacagtatatactcgcttttaaatagttcttatagttgtatgaatataaacaaaaaa
cagttaatagaaagtatttttagcgatagaagtaaaacaaaagagtatttaaaactgcag
ttagaagaaattaaatgggatgattatttaaggctcagcatgattaaatcaccaataaat
ttaatagaagaaattataaatgagattaaacctgaactgaattattataaaaagataata
aataaatttaatgaactagaagctaaggtaataactacagaatataaaatgaatttagat
cattgtttatttttaatacgaaaaaacttcaatggaaatgtagcgactttaagtacaata
gaaaattacctaagaattaatattcaaactaatgatatagaaagtaaaaagaagataggt
gatacatataaaaagaattttattaagtgcatgactatacataaggctaaaggtcttgaa
tatgaatatattattttacctataacttcacatgagtttatttctcataatcaggacttt
gacttaattattgatagggataattttgaaaatgtaaacataggatataaagttatttta
ggtaatgattataaagaagtaagtaataatatatatttacaaaaaaaatatgatgaaaat
gaagaaataaaaggtgaagaaacaagactgttttatgtagctttaacaagagctaaaaag
gaattatacattcataaaaaaagtataacatcatcttatataaactcatggatgacgtta
attccagagggggaatacaatgtttag
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