Terrisporobacter petrolearius: TPHSE_28930
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Entry
TPHSE_28930 CDS
T10349
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tpet Terrisporobacter petrolearius
Brite
KEGG Orthology (KO) [BR:
tpet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpet03032
]
TPHSE_28930 (topA)
03400 DNA repair and recombination proteins [BR:
tpet03400
]
TPHSE_28930 (topA)
Enzymes [BR:
tpet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TPHSE_28930 (topA)
DNA replication proteins [BR:
tpet03032
]
Prokaryotic type
DNA Topoisomerases
TPHSE_28930 (topA)
DNA repair and recombination proteins [BR:
tpet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TPHSE_28930 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XAM38609
LinkDB
All DBs
Position
complement(2912379..2914454)
Genome browser
AA seq
691 aa
AA seq
DB search
MAKTLVIVESPAKAKTIEKFLGKSHYTVKASVGHVRDLPKSTLGVDIDNDFEPRYINIRG
KGDLIKELKKEAKKSKKVYLATDPDREGEAISWHLSYILGIDENDKCRIEFNEITKDAIK
KAIKSPRNIDLKLVDAQQARRVLDRLLGYQISPILWAKVRKGLSAGRVQSVTTKLICERE
REINQFVPREYWNLEIEGKTQDGEIVLFKFVSFNNEKMDLNNEEEVNKILDDIKNGKLIV
EKIESKTRRKSAPKPFTTSMLQQDAANKLSFTTKKTMIIAQELYEGVDIEGEGTVGLISY
IRTDSKRISEEAKEKSKSYILEELGENYYKVNTDKKEIKDKKKVQDAHEAIRPTSVLRTP
NSVKSSLSKDQFKLYNLIWRRFVASQMEDSVFDVLNVDCKIGNALFRATGSVMKFDGYTK
IYNFTEREDKILPPIKESDELQVNQFMPSQHFTQPPARFTEASLVKTLEELGIGRPSTYA
PTITTILNRGYVEKQGTSLHPTELGMIVTDILNINFQKFIDVDFTVQMESKLDEIEEGDI
RWKSVVGEFYEPLKEAIEEANEKIEKINMDEETDEICELCGSNMVIKYGRFGKFMACKNY
PDCKNTKPLVNKVGVKCPKCKDGDIILRKSKKGKAFYGCSNYPECDFISWYKPTGEICKE
CGSYMVEKQTKSETKEICSNKECKAEGRILE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacattggtaattgtggaatcgcctgcaaaagctaaaacaatagaaaaattc
ttaggaaaaagccattatactgtaaaggcttcagttggtcatgttagagatttacctaaa
agtactttaggtgttgatatagataatgattttgaaccaagatatattaatatcagaggt
aaaggcgatttaataaaagaattaaaaaaagaagctaaaaaatctaagaaagtatatctg
gcaactgaccccgatagagaaggagaggcaatctcttggcatttatcatatatacttggt
attgatgaaaatgataaatgcagaatagaatttaatgagataacaaaagatgctattaaa
aaagctataaaaagtcctaggaacattgatttaaaacttgtagatgctcaacaagcgaga
agggtactagatagacttttaggatatcaaataagtcctatcctttgggccaaagtaaga
aaaggacttagtgcaggtagggtacaatcagtaacaacaaaattgatatgtgaaagagaa
agagaaattaatcaatttgtacctagagaatattggaatttagaaattgaaggaaaaact
caagatggagaaattgtattatttaaatttgtatcatttaataatgaaaaaatggattta
aataatgaagaagaagtaaataaaattttagatgatataaaaaatggaaaactaatagta
gaaaaaattgaatcaaaaacaagaagaaaatctgctccaaagccatttacaactagtatg
cttcaacaagatgcagctaataagttatcttttacaactaaaaagacaatgataatagct
caagagttatatgaaggtgtggatattgaaggagaaggaacagtaggtcttatatcatac
ataagaacagattcaaagagaatatccgaagaagctaaggaaaagtcaaaatcatatatc
ttagaagaattaggagaaaactactataaagttaatacagataaaaaagagattaaagat
aagaaaaaagtacaagatgcccatgaagctattaggccaacctcagtacttagaacaccg
aatagtgtgaaaagttcattaagtaaagatcaatttaagctttataacttgatttggaga
agatttgtagctagtcagatggaagactctgtattcgatgtactaaatgtagattgtaaa
ataggtaatgcattatttagagcgacaggatcagtaatgaaatttgatggatatactaag
atttataattttacagaaagagaagataaaattttacctccaataaaagaaagtgatgag
ctacaagttaatcaatttatgccttctcaacactttactcagccaccggcaagattcact
gaggcaagtttagttaaaactttagaagaacttggcataggtagaccaagtacttacgct
cctacaataacaactatactaaatagaggttatgttgaaaaacaaggtactagtttacac
ccaacagagttaggaatgatagtaactgatattttaaatataaatttccaaaaattcata
gatgttgatttcactgttcagatggagagtaaattagatgaaatagaagaaggcgacata
agatggaaaagtgttgttggtgagttctatgagcctttaaaggaagctatagaagaagct
aacgaaaaaatagaaaaaattaatatggatgaagaaactgatgaaatatgtgaactatgt
ggttcaaatatggttattaaatacggtagatttggcaaatttatggcatgtaaaaactat
ccagattgtaaaaatacaaaaccattggttaataaagtaggagtaaaatgtcctaagtgt
aaagatggagatattattcttagaaaatctaaaaaaggtaaagccttttatggatgttca
aattatccagaatgtgattttataagttggtacaaacctacaggagaaatttgcaaagaa
tgtggttcttacatggtagaaaaacaaacaaaaagtgaaacaaaagagatatgttctaat
aaagagtgtaaggccgaaggaagaattttggaataa
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