Terrisporobacter petrolearius: TPHSE_36340
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Entry
TPHSE_36340 CDS
T10349
Symbol
nfo_2
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tpet Terrisporobacter petrolearius
Pathway
tpet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TPHSE_36340 (nfo_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpet03400
]
TPHSE_36340 (nfo_2)
Enzymes [BR:
tpet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
TPHSE_36340 (nfo_2)
DNA repair and recombination proteins [BR:
tpet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TPHSE_36340 (nfo_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
XAM39344
LinkDB
All DBs
Position
complement(3717673..3718506)
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AA seq
277 aa
AA seq
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MLNIGCHLSVSKGFKNMGNEALSIKANTFQFFTRNPRGGKAKDLDEKDIQAFLELAKENK
FAQLLAHAPYTLNACAADESKREFAIQTFADDLRRLEMVPGNLYNFHPGSHVKQGVEVGV
QYIADMINQTLTPNHSTTVLLETMAGKGTEIGRNFEELRAIIDKVELGDRIGICMDTCHV
FDAGYDIVNDLDGVLEEFDRVLGLDRLKAIHLNDSLNVRGSHKDRHAKIGEGNIGLEAIT
RIINHPKLKHLPFLLETPNELDGYAKEIELLKSVYND
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatataggatgtcatttatcagtatcaaaaggatttaaaaatatgggaaatgaa
gctctaagtataaaagctaatacttttcagttttttactcgtaatccgagaggtggaaaa
gcaaaagatttagatgaaaaagatatacaagctttcttagaattagccaaagaaaataaa
tttgcccaattattagctcatgcaccatatactttaaatgcttgtgcagcagatgaaagt
aaaagagaatttgctatacagacttttgcagatgatttaagaaggttagaaatggtgcca
ggaaatttatataacttccatccaggaagtcatgtgaaacaaggtgtagaagttggcgtt
caatatattgcagatatgataaatcaaactttaacacctaatcattctactacagtatta
cttgaaactatggctggaaaaggtacagaaataggaagaaactttgaagaattaagagca
ataatagataaggttgaattaggcgacagaataggtatatgtatggatacatgccatgta
ttcgatgctggttacgatatagtaaatgatttagatggtgtattagaagaatttgatagg
gttttaggtttggatagactaaaggcaattcacttaaatgatagtttgaatgttcgagga
agtcataaagatagacatgctaaaataggtgaaggaaatataggtttagaagctataact
agaataataaatcacccaaaacttaaacatttaccatttttacttgaaacaccaaatgaa
ttagatggatatgcaaaagaaattgaattacttaaaagtgtatataatgattaa
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