Terrisporobacter petrolearius: TPHSE_37030
Help
Entry
TPHSE_37030 CDS
T10349
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tpet Terrisporobacter petrolearius
Pathway
tpet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHSE_37030 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpet03019
]
TPHSE_37030 (deaD)
03009 Ribosome biogenesis [BR:
tpet03009
]
TPHSE_37030 (deaD)
Enzymes [BR:
tpet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TPHSE_37030 (deaD)
Messenger RNA biogenesis [BR:
tpet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TPHSE_37030 (deaD)
Ribosome biogenesis [BR:
tpet03009
]
Prokaryotic type
rRNA helicases
TPHSE_37030 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
XAM39413
LinkDB
All DBs
Position
complement(3780001..3781668)
Genome browser
AA seq
555 aa
AA seq
DB search
MNTIKFEDLPISEEIKRSVAELGFEEPSPIQVQSIPVILTGKDVIGQAQTGTGKTAAFSI
PVLDMVDPNKKSVQAVVLCPTRELAIQVSSEMKKLGKYKSGIKTLPVYGGQPIDRQIKSL
KSGVQVVIGTPGRVIDHINRRTLKMDQVKMLVLDEADEMLDMGFREDIELILEQTPAERQ
TTFFSATMSKPILELTKKYQDDPQLIKIVRKELTVPNIKQYYIETRRANKLEVLCRLIDV
YNPKLSVVFCNTKRGSDELVSELQARGYFADALHGDLKQTQRDIVMDKFRQGTIDILVAT
DVAARGIDVDDVEAVFNYDLPQDEEYYVHRIGRTGRAGREGISFSFVFGKEVRKMKDIER
YTKSKLVRHDIPTIADVEEKKVTAFFKQVKETIKESNLSKQTQWLENLCEEEGLEVIEIA
AALVKLALGDEEKAEIIEEKSSYRDESGRRGRKDRDRGERGERSDRKRSRSAEAGMVRLF
INVGKDQRVQAKDIVGAIAGEAGIPGKLVGTIDIYDKYTFVEVPKENSKNVLDKMKNIKI
KGNKINIEKANTRRK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaataaaatttgaagatttaccaataagtgaagaaataaaaagatcagtggcg
gaactaggatttgaggagccatctcccattcaagttcagtctataccagtaattttaaca
ggaaaagatgttataggacaagcgcaaacgggaacaggaaagacggcagctttctctata
ccagtgttagacatggtggatcctaacaaaaaaagtgtacaggcagtagtattatgtcct
acaagagaacttgcaattcaagtatctagtgaaatgaaaaaattaggtaaatataaaagt
ggcataaagacacttccagtttacggcggacaaccaatagatagacaaataaaatcatta
aagagcggagtacaagtagtaataggaacaccaggacgtgttatagaccatataaatcgt
agaactttaaaaatggaccaagtgaaaatgttagttcttgatgaagcggatgaaatgtta
gatatgggattcagagaagatatcgagttaatattagaacaaactccagctgaaagacaa
acgactttcttttcagcgacaatgtcaaaacctatattagaattaactaaaaaataccaa
gatgatcctcagttaataaaaatagtaagaaaagaattaactgtaccaaatataaaacaa
tactatatagaaacaagaagagctaataaattagaagtattatgtagattaatagatgta
tataatccaaaattatcagtagtattctgtaatacaaaaagaggttctgatgagttagtt
agtgaattacaagcaagaggatattttgcagatgctcttcatggagatttaaagcaaact
caaagagatatagtaatggataaattcagacaaggtacaatagatatacttgttgctaca
gatgttgcagctagaggtatagatgttgatgatgttgaagctgtatttaactatgacctt
ccacaagacgaagaatactatgtacacagaatcggtagaacaggtcgtgctggtagagaa
gggatatctttctcatttgtatttggaaaagaagtaagaaaaatgaaagatatcgaaaga
tatacaaaatctaaattagttagacatgatataccaacaatagctgatgttgaagaaaag
aaagtaactgcattcttcaaacaagttaaagaaacaataaaagaaagtaacttatcaaag
caaacacaatggctagaaaatctttgtgaagaagaaggattagaagttatagaaatagca
gcagctcttgttaaacttgctttaggtgacgaagagaaggcagaaataatagaagaaaag
tcaagctacagagatgagtctggaagaagaggacgtaaagacagagatagaggcgaaaga
ggcgaaagaagcgatagaaaacgtagtagaagtgctgaagctggaatggtaagattattt
atcaacgttggtaaagaccaaagagtacaagctaaagatattgttggagcaatagctgga
gaagcaggaattccaggtaaattagttggaacaatagacatatatgacaaatatacattt
gtagaagttccaaaggaaaattctaaaaatgtattagataaaatgaaaaatataaaaatt
aaaggtaataaaattaatatagaaaaagccaatacaagaagaaaataa
DBGET
integrated database retrieval system
