Terrisporobacter petrolearius: TPHSE_38020
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Entry
TPHSE_38020 CDS
T10349
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
tpet Terrisporobacter petrolearius
Pathway
tpet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPHSE_38020 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpet03400
]
TPHSE_38020 (uvrB)
DNA repair and recombination proteins [BR:
tpet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPHSE_38020 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TPHSE_38020 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
P-loop_SecA
SWI2_SNF2
Kinesin
AAA_22
cpSF2-GREB1
Microtub_bd
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XAM39511
LinkDB
All DBs
Position
complement(3905183..3907153)
Genome browser
AA seq
656 aa
AA seq
DB search
MDFEIQSAFKPTGDQPEAIKEIVTSINKDEKFQTLLGVTGSGKTFTMANIIREVKKPTLI
LAHNKTLAAQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVASSDTYIEKDSSINDEIDKL
RHSATASILERDDVIVVSSVSCIYGIGDPDDYKKLMLSIRTGMEIDRDTLIRKLVDIQYE
RNDINFVRGTFRVRGDILELFPASDDEKAIRIEFFGDEIDRIVEIDYVTGKILGTRGYIA
VFPASHYVTTPEKVAHAVEAIEKELLERVQYFKEKDKLIEAQRIEQRTKYDIEMLNEIGS
CQGIENYSRHITGREEGEKPYTLMSFFPDDFLLIVDESHVTIPQVRGMYAGDRSRKQSLI
ENGFRLPSAYDNRPLNFSEFEENINQVLFVSATPGAYEIEHSTTVAQQIIRPTGLLDPVI
EVRPIENQIDNLVGEINEVVERKERVLITTLTKKMSEDLTNYLKEIGIRVKYLHSDIDTL
ERTEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSETSLIQTVGRAA
RNSEGRVIMYADKITRSMAATIEETKRRREIQSQYNEENGITPKTIVKEVRDSIETLKPA
DEEVVFGIAESEDEYEVQNSIETLQKEMIEAAQNLQFERAAQLRDKIKELEERIKN
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaattcaatcagcttttaagccaacaggggatcagccagaagcaataaaa
gagattgttacttcaattaataaggatgaaaaatttcaaacattactaggggtaacaggt
tcgggtaaaacttttactatggcaaatataattagagaggtaaagaaaccaaccttaatc
ctagctcataataaaactttagccgctcaattatatagtgagtttaaagagtttttccct
aataatgcagttgaatactttgtaagttattatgattattatcaaccagaagcgtatgta
gcatctagtgatacatacatagaaaaagattcaagtataaatgatgaaatagataaactg
agacactcagctacagcatctatattagaaagagatgatgtaatagtagtatcttctgtt
tcttgtatttatggtataggagatccggacgattataaaaaacttatgttatctattaga
acaggaatggaaattgatagagatacgcttataagaaaattagttgacatacaatatgaa
agaaatgatattaactttgttagaggaacttttagagttagaggggatattttagaatta
ttcccagcaagtgatgatgaaaaagctataagaatagaattttttggggatgaaatagat
agaatagtggaaattgactatgttacaggaaaaattttaggaacaaggggttatatagca
gtattcccagcatcacattatgttacaactccagaaaaagttgcccacgcagtggaagct
atcgaaaaagagctattagaaagagttcaatattttaaagaaaaggataaattaatagaa
gctcagagaattgaacaaagaactaaatatgatatagaaatgcttaatgaaataggtagc
tgtcagggaatagaaaactattcaagacatataacgggaagagaagaaggtgaaaaacct
tatacactaatgagtttcttcccagatgattttttattaatagtagatgaatctcacgtt
actattcctcaagttagaggtatgtatgcaggagaccgctcaaggaaacaatcattgata
gaaaatggatttagattaccttctgcttatgacaatagacctttaaatttctctgaattt
gaagaaaatataaatcaagtactgtttgtttctgcaacaccaggggcttatgaaatagag
cattctacaactgtggcacagcaaataataagaccaacaggtttactggacccggttata
gaagtaaggccaattgaaaatcaaatagataatttagttggtgaaataaatgaggttgtt
gaaaggaaagaaagagtattaattacaactttaactaagaaaatgagtgaagatttaact
aactatttaaaagagataggaataagggttaaatatttacattcagatatagatacgcta
gaaagaactgaaataattagagacctaagactgggtaaatttgatgtattagtaggtata
aacttacttagagaaggtttggatataccggaggtttctttagttgccatattagatgca
gataaagaaggtttcttaagatctgaaacttcattaatacagacagtaggacgtgcggct
agaaactcggaaggtagagttataatgtatgctgataaaattacacgttctatggcagca
actattgaagaaactaagagaagaagagaaatacagtctcaatataacgaagaaaacgga
ataactcctaaaactattgtcaaagaagttagggatagtatagaaacacttaaaccagct
gatgaagaagttgtatttggaattgctgaaagtgaagatgaatatgaagttcaaaatagt
atagaaacgctacaaaaagaaatgatagaagctgcacaaaacttacaatttgaaagagca
gctcagctaagagataagataaaagagttggaagaaaggataaagaattaa
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