KEGG   Tetrapisispora phaffii: TPHA_0A00710
Entry
TPHA_0A00710      CDS       T02235                                 
Symbol
TPHA0A00710
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03030  DNA replication
tpf03410  Base excision repair
tpf03420  Nucleotide excision repair
tpf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TPHA_0A00710 (TPHA0A00710)
   03410 Base excision repair
    TPHA_0A00710 (TPHA0A00710)
   03420 Nucleotide excision repair
    TPHA_0A00710 (TPHA0A00710)
   03430 Mismatch repair
    TPHA_0A00710 (TPHA0A00710)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpf03032]
    TPHA_0A00710 (TPHA0A00710)
   03036 Chromosome and associated proteins [BR:tpf03036]
    TPHA_0A00710 (TPHA0A00710)
   03400 DNA repair and recombination proteins [BR:tpf03400]
    TPHA_0A00710 (TPHA0A00710)
DNA replication proteins [BR:tpf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    TPHA_0A00710 (TPHA0A00710)
  DNA Replication Termination Factors
   ELG1-RFC complex
    TPHA_0A00710 (TPHA0A00710)
Chromosome and associated proteins [BR:tpf03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    TPHA_0A00710 (TPHA0A00710)
DNA repair and recombination proteins [BR:tpf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     TPHA_0A00710 (TPHA0A00710)
  Check point factors
   HRAD17(Rad24)-RFC complex
    TPHA_0A00710 (TPHA0A00710)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_14 AAA_22 Viral_helicase1 AAA_16 AAA_3 Rad17 nSTAND3 RuvB_N RCF1-5-like_lid nSTAND_NTPase5 Mg_chelatase AAA_assoc_2 AAA_19 MeaB ATPase_2 NTPase_1 ABC_tran nSTAND6 DNAX_ATPase_lid FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 11532446
NCBI-ProteinID: XP_003683590
UniProt: G8BMM8
LinkDB
Position
1:complement(129039..130016)
AA seq 325 aa
MSKAALSLELPWVEKYRPHLLKDIVGNEDTIERLKHIAKDGNMPHMIISGLPGIGKTTSI
HCLAHELLGDSYSQAVLELNASDDRGIDVVRNQIKHFAQKKCHLPTGKHKIIILDEADSM
TAGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYTKLSDEQVLKRLLEIT
KAEDVKYTNDGLEALIFTAEGDMRQAINNLQSTVAGHSLVNGDNVFKIVDSPHPLIVKKM
ILAPTLDDSLLILRKELWDKGYSAVDIVTTSFRVTKTLYELKEPQRLDMIKEIGITHMRI
LEGVGTYLQLAAMMAKLSTHKLSTN
NT seq 978 nt   +upstreamnt  +downstreamnt
atgagtaaagctgcactttctttggaactaccttgggtagaaaaatatcgtcctcatttg
ttaaaggatattgttggtaatgaagataccattgaaagattgaaacatattgccaaggat
ggtaatatgcctcatatgattatttctggtttgcctggtattggtaaaactacatctatt
cattgtctggctcatgagttattaggagattcctattcgcaagccgtgttggaattgaac
gcaagtgatgatagaggtatcgatgtggtcagaaatcaaatcaaacattttgctcaaaag
aaatgtcacttacctacagggaagcataagatcattatattagatgaagctgattcaatg
actgctggtgctcaacaggctttgagaagaacaatggaaatatactctaacacaactaga
tttgcgtttgcttgtaatcaatcgaataagataattgagcctttgcaaagtagatgtgct
atattacgttatacaaaactgagtgatgaacaggttctaaaaagattattggaaattaca
aaagctgaggatgtcaaatatacaaatgatggtcttgaggctctaatctttacagcagaa
ggtgatatgagacaagctataaataatttacaaagtacggttgcaggtcatagtttggtc
aatggtgataacgttttcaaaattgtagattcaccacatccactaatagtgaaaaaaatg
atactggcaccaacattggatgactctttattgatcttgagaaaagaattgtgggataaa
ggttactccgctgttgatatcgtcaccacaagtttccgtgtaacaaagacattgtatgaa
ttaaaagagccgcaaagattagacatgatcaaagaaataggaattacccacatgagaatt
ttagaaggtgttggtacctatcttcagttagctgccatgatggcaaaattaagcacacat
aaactctcaacaaactga

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