Tetrapisispora phaffii: TPHA_0A00710
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Entry
TPHA_0A00710 CDS
T02235
Symbol
TPHA0A00710
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03030
DNA replication
tpf03410
Base excision repair
tpf03420
Nucleotide excision repair
tpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPHA_0A00710 (TPHA0A00710)
03410 Base excision repair
TPHA_0A00710 (TPHA0A00710)
03420 Nucleotide excision repair
TPHA_0A00710 (TPHA0A00710)
03430 Mismatch repair
TPHA_0A00710 (TPHA0A00710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0A00710 (TPHA0A00710)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0A00710 (TPHA0A00710)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0A00710 (TPHA0A00710)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TPHA_0A00710 (TPHA0A00710)
DNA Replication Termination Factors
ELG1-RFC complex
TPHA_0A00710 (TPHA0A00710)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TPHA_0A00710 (TPHA0A00710)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TPHA_0A00710 (TPHA0A00710)
Check point factors
HRAD17(Rad24)-RFC complex
TPHA_0A00710 (TPHA0A00710)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
AAA_22
Viral_helicase1
AAA_16
AAA_3
Rad17
nSTAND3
RuvB_N
RCF1-5-like_lid
nSTAND_NTPase5
Mg_chelatase
AAA_assoc_2
AAA_19
MeaB
ATPase_2
NTPase_1
ABC_tran
nSTAND6
DNAX_ATPase_lid
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
11532446
NCBI-ProteinID:
XP_003683590
UniProt:
G8BMM8
LinkDB
All DBs
Position
1:complement(129039..130016)
Genome browser
AA seq
325 aa
AA seq
DB search
MSKAALSLELPWVEKYRPHLLKDIVGNEDTIERLKHIAKDGNMPHMIISGLPGIGKTTSI
HCLAHELLGDSYSQAVLELNASDDRGIDVVRNQIKHFAQKKCHLPTGKHKIIILDEADSM
TAGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQSRCAILRYTKLSDEQVLKRLLEIT
KAEDVKYTNDGLEALIFTAEGDMRQAINNLQSTVAGHSLVNGDNVFKIVDSPHPLIVKKM
ILAPTLDDSLLILRKELWDKGYSAVDIVTTSFRVTKTLYELKEPQRLDMIKEIGITHMRI
LEGVGTYLQLAAMMAKLSTHKLSTN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagctgcactttctttggaactaccttgggtagaaaaatatcgtcctcatttg
ttaaaggatattgttggtaatgaagataccattgaaagattgaaacatattgccaaggat
ggtaatatgcctcatatgattatttctggtttgcctggtattggtaaaactacatctatt
cattgtctggctcatgagttattaggagattcctattcgcaagccgtgttggaattgaac
gcaagtgatgatagaggtatcgatgtggtcagaaatcaaatcaaacattttgctcaaaag
aaatgtcacttacctacagggaagcataagatcattatattagatgaagctgattcaatg
actgctggtgctcaacaggctttgagaagaacaatggaaatatactctaacacaactaga
tttgcgtttgcttgtaatcaatcgaataagataattgagcctttgcaaagtagatgtgct
atattacgttatacaaaactgagtgatgaacaggttctaaaaagattattggaaattaca
aaagctgaggatgtcaaatatacaaatgatggtcttgaggctctaatctttacagcagaa
ggtgatatgagacaagctataaataatttacaaagtacggttgcaggtcatagtttggtc
aatggtgataacgttttcaaaattgtagattcaccacatccactaatagtgaaaaaaatg
atactggcaccaacattggatgactctttattgatcttgagaaaagaattgtgggataaa
ggttactccgctgttgatatcgtcaccacaagtttccgtgtaacaaagacattgtatgaa
ttaaaagagccgcaaagattagacatgatcaaagaaataggaattacccacatgagaatt
ttagaaggtgttggtacctatcttcagttagctgccatgatggcaaaattaagcacacat
aaactctcaacaaactga
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