Tetrapisispora phaffii: TPHA_0A01920
Help
Entry
TPHA_0A01920 CDS
T02235
Symbol
TPHA0A01920
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03022
Basal transcription factors
tpf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TPHA_0A01920 (TPHA0A01920)
09124 Replication and repair
03420 Nucleotide excision repair
TPHA_0A01920 (TPHA0A01920)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0A01920 (TPHA0A01920)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0A01920 (TPHA0A01920)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0A01920 (TPHA0A01920)
Enzymes [BR:
tpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TPHA_0A01920 (TPHA0A01920)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TPHA_0A01920 (TPHA0A01920)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TPHA_0A01920 (TPHA0A01920)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TPHA_0A01920 (TPHA0A01920)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
11532204
NCBI-ProteinID:
XP_003683709
UniProt:
G8BMZ7
LinkDB
All DBs
Position
1:complement(387645..389966)
Genome browser
AA seq
773 aa
AA seq
DB search
MKFYIDDLPVLFPYPKIYPEQYHYMCDIKRTLDAGGNSILEMPSGTGKTVSLLSLTVAYQ
MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGFKEEFRGLGLSSRKNLCLHPVV
NKERKGTVVDEKCRRMTNGQAKRAIEADPNANAELCDYHENLYKLEVDDYLPNGVFSFEK
LIKYCNDKTLCPYFIVRRMISMCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI
DNVCIESLSLDLTNDILKKATKGANTLANKIEDVKKVDSKKLQDEYDKLVQGLHLSENEN
EDDEPFVENPVLSEDILKEAIPGNIRRAEHFISFLKRLIEYLKTRMKVLHVISETPKSFL
QHLKQLTFIDKKPLRFCAERLSLLVRTLEVTDVEDFAALKDIATFATLVSTYEDGFLLII
EPFELENAAVPNPILRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFTTVLQ
KSYTMTLTKKTFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLIEFAKITPDGMVVF
FPSYLYMESIISMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILFS
VARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAMR
HAAQCLGRVLRGKDDYGVMVLADRRFSRRRNQLPKWIAQGLSDANLNLSTDMAVSNTKKF
LRTMAQPTNPNDQEGVSVWNHEELVKHQEEIENRRTGLHNAAIGETEDIEMKY
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttatattgacgatttgccggttttgtttccatatccaaagatatatcctgag
caatatcattatatgtgtgatatcaaaagaactttagatgcgggtggtaatagtatatta
gaaatgccttccggtacaggcaaaactgtttctctattatcattaactgttgcttatcaa
atgcactatccagaacacagaaagattatatattgttctcgtactatgtctgaaattgaa
aaagcattggttgaattggaaaatctgatggattatagaactaaagaattaggttttaaa
gaagaatttagaggattaggattatcatcaagaaagaatctatgtctacatcctgtagta
aataaagaaagaaaaggtactgtggttgatgagaaatgtcgtcgtatgaccaatggtcaa
gccaaacgtgctatagaagccgatccaaatgctaacgctgaattatgtgactatcatgaa
aatttatacaaactagaagttgatgattatttaccaaatggtgttttttcttttgaaaaa
ttgattaaatattgtaacgataagaccctgtgcccatatttcattgtacgtcgtatgatt
tcaatgtgtaatatcattatttactcataccattatctgttggatccaaaaattgcagaa
agagtttcaaatgaagtttcaaaagattctattgttatttttgatgaagcgcataatata
gataacgtttgtatagaatcattgtcattagatctgacgaatgatattctaaaaaaagca
acaaaaggtgcgaacactttagccaataaaatagaggacgtaaagaaagtagattctaaa
aaattacaggatgaatatgataaactggtccaaggtttacatctttcagaaaatgaaaat
gaggatgatgaaccatttgtagagaatccagtattatctgaagatattttaaaggaggct
atacctggtaatattagaagagccgaacattttatttccttcttaaagagattgatcgag
tatctaaagacaagaatgaaagtattacatgttatctcagaaacacccaaatcattttta
caacatttaaaacaacttacttttatagataaaaaaccattacgattctgtgcagaaagg
ttatcactattggtgaggacattagaagtgacagatgttgaggactttgctgcattgaaa
gatattgcaacatttgctacgttagtatctacatatgaggatgggttcttattaatcatc
gaaccatttgaattagaaaacgcggctgtcccaaatccaatattacgttttacctgttta
gatgcatcaattgctatcaaacctgtttttgaacgtttttcttctgttattattacctcg
ggtactatttctccattggatatgtatccaagaatgttaaatttcaccactgtgttacaa
aaatcttatacgatgacattgactaagaagaccttcttaccgatgattattaccaaaggt
tctgatcaagtagcaatttcttcaagatttgaaattagaaatgacccaagtattgttcgt
aattatggttctatgttaatcgagtttgcaaaaattacaccagatggtatggttgttttc
ttcccttcatatctatacatggaaagtattatttctatgtggcaaacaatgggtatattg
gacgaagtttggaagcataaattaatcttagttgaaactcccgatgcccaagaaacctca
ttggccttagagacttatagaaaagcatgctctaatggtagaggtgccattttattttca
gtcgctagaggtaaagtgtctgagggtatcgattttgaccatcattatggtagaactgtg
ttaatgattggtattcctttccaatataccgaatctcgaattttaaaagctcgtttggaa
tttttaagagagaattatcaaataagagaaaatgacttcttatctttcgatgcaatgaga
catgctgcgcaatgtctgggtagagttttacgaggtaaagatgattacggtgtaatggtg
cttgcagatcgtagattttccagaagaagaaatcaattaccaaaatggattgcacaaggt
ttatctgatgctaatttaaatctttccaccgatatggctgtctccaatactaagaaattc
ttaaggacaatggcacaaccaacaaatccaaatgaccaagaaggtgtttcagtttggaat
catgaagagttagtgaaacatcaggaagaaatagaaaataggagaactggtttacataat
gctgctatcggcgaaactgaggacatagaaatgaaatattaa
DBGET
integrated database retrieval system
