Tetrapisispora phaffii: TPHA_0A02560
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Entry
TPHA_0A02560 CDS
T02235
Symbol
TPHA0A02560
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0A02560 (TPHA0A02560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0A02560 (TPHA0A02560)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TPHA_0A02560 (TPHA0A02560)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
11532412
NCBI-ProteinID:
XP_003683773
UniProt:
G8BN61
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All DBs
Position
1:549053..550234
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AA seq
393 aa
AA seq
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MTENSIVNIAPLSFPADIISKISPELSLQRYLSTSIRPNLRSFEEFRDVHIEKDKISHYA
QSLGSSGNVTDPNNEILGCNVLKSGETVIVTSITGGVVEDMETVSEFEESILEISNEDDD
TKRKTISHYASVFPSVLIESGRNKHFPSDEEIVIAQKLHSNILHSGLISKQALKVSCGVR
SVDVDGSISIVYPDESDTENKDLFSNISNKKKWSYVLYAKIAVFGRNGPVFDLCWNSLIY
ALRSTKLPRVFVDERASDLKMTVRTRGKSLTVREAYEVLSDPYRFLPLNISSSDISYASN
FGIINLDPEAQLITETEGENMDITEPSSVLLADIDTEIEEKNVRSTISIISNGKGDFKSF
TVVGGNVKITSDIIKSAIKLSKERSLDLSKKEV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaattcaatagttaacattgcacctctgtcgttcccggctgatataatttca
aagatttctcctgagttatcacttcagaggtacttatctacatccattagaccaaaccta
cgttcatttgaagaattcagagatgtacacattgagaaagataaaatctcacattatgct
caaagtttagggtcttctggaaatgttacagatccaaataatgagatactagggtgcaat
gttttgaaaagtggagaaactgtaattgttactagtataactggaggtgttgttgaagat
atggagactgtttctgaatttgaagaaagtattttggaaatttcaaatgaagatgatgat
acaaagagaaaaaccatatcacattacgcttcggtatttccttctgttttaatagaatcc
ggtagaaataaacattttccatccgatgaagaaatagtcattgctcaaaaattacattcc
aatatactacattccggtttaatatcgaagcaagcgctgaaggtttcttgtggtgttcgt
tctgtcgatgtggatggatctatatctatcgtataccctgatgagagtgatacagagaac
aaagacttatttagtaatatatccaataaaaaaaaatggtcatacgttttatatgcgaag
attgcagtgtttggaagaaatgggcccgtatttgacctttgttggaattcgttaatttat
gcgttgagatcaaccaaactgccaagagtattcgttgatgaaagagcttctgaccttaaa
atgactgtcagaactagagggaagagtttgactgtcagagaagcttatgaagttttatca
gatccatacagatttttaccattaaacatttcttcatctgatataagctatgcttcgaat
tttggtataatcaatttggatccggaagcccaactcattaccgaaacagagggtgaaaat
atggatattactgaaccatcatctgttttgttagctgacatagatacagagattgaagaa
aaaaatgtacgatcaacaatttcaattatttctaatgggaaaggtgattttaagagcttc
actgtagttggagggaacgtaaaaattacaagtgatatcattaaatctgcaattaagtta
tcaaaagaaagatcattagatttaagcaaaaaagaagtgtga
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