Tetrapisispora phaffii: TPHA_0A03400
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Entry
TPHA_0A03400 CDS
T02235
Symbol
TPHA0A03400
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TPHA_0A03400 (TPHA0A03400)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0A03400 (TPHA0A03400)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
TPHA_0A03400 (TPHA0A03400)
Prokaryotic type
Archaeal type
TFB
TPHA_0A03400 (TPHA0A03400)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF1456
Motif
Other DBs
NCBI-GeneID:
11532702
NCBI-ProteinID:
XP_003683851
UniProt:
G8BND9
LinkDB
All DBs
Position
1:complement(746253..747311)
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AA seq
352 aa
AA seq
DB search
MSQVSAAIPQKQRRGPNLNIVLTCPECKVYPPKVVERFSEGDVVCALCGLVLSDKLVDTR
SEWRTFSNDDQNGDDPSRVGEAANPLLDGNNLSTRIGQGESTDMRFTKELNRAQGKNVMD
KKDHEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKSLRGKSSESVMAASILIGC
RRASVARTFKEIQSIIHVKTKEFGKTLAIMKGILREKSADGFIKIDTDNMSGAQNLTYIP
RFCSHLGLPMQVTTSAEYTAAKCKEIEEIAGKSPITIAVVSIYLNILLFKIPITAARVGQ
ILQVTEGTIKSGYKILYEHRAKLVDPQLIANGTVILEDLPKAEKDRNIKKEK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagtatcagcggctattcctcagaagcaaagaagaggtccaaatttaaatatt
gtgttgacatgtcccgaatgtaaagtttatcctccaaaggttgttgaaagatttagtgag
ggtgatgttgtctgtgcattgtgtgggttggtgttatctgataaactggttgatacaaga
tctgaatggagaacattttccaatgatgatcaaaatggtgatgatccaagtcgtgtgggt
gaagccgctaatccattattggacggtaataacttatctaccagaattggtcaaggtgag
agtacagatatgagatttacaaaagagttgaatagagcacaaggtaagaatgttatggat
aaaaaggatcatgaagttcaggcagcttttgcaaaaattacaatgttatgtgatgccgct
gaattaccaaagatcgttaaagattgtgctaaagaagcttacaaactatgtcatgatgaa
aaatctcttagaggtaagtcttctgaaagtgtgatggctgcatccatcttaattggttgt
agaagagcttcggtggcaaggacctttaaagaaattcaatctattattcatgttaaaaca
aaagaatttggtaaaaccttggctataatgaagggtatattaagagagaaatcagcagat
ggttttattaaaattgatactgataacatgagtggtgcacagaatttgacatatatacca
agattttgttctcatttgggtttaccaatgcaagttacgacttctgcagaatacacagca
gccaaatgtaaagaaattgaagaaatcgcaggtaaatcgccaattactattgctgttgtt
tctatttatttaaatatcttgttgtttaaaataccaattactgcagcaagggtaggtcaa
attcttcaagtaacagaaggtactattaaatcgggctataaaatattatatgaacacaga
gcgaagttagtcgatccacaattaatagcaaatggaacagtaatcttagaagacttgcca
aaggctgaaaaggacagaaacattaaaaaagaaaagtaa
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