Tetrapisispora phaffii: TPHA_0A03500
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Entry
TPHA_0A03500 CDS
T02235
Symbol
TPHA0A03500
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0A03500 (TPHA0A03500)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0A03500 (TPHA0A03500)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TPHA_0A03500 (TPHA0A03500)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TPHA_0A03500 (TPHA0A03500)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
11532736
NCBI-ProteinID:
XP_003683861
UniProt:
G8BNE9
LinkDB
All DBs
Position
1:complement(769721..771367)
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AA seq
548 aa
AA seq
DB search
MSQRKLQQEVDKLLKKVKEGLEEYDLIHDKFQASDPDNTSYREKLESDLKREIKKLQKHR
DQIKTWLSKEDIKDKVQQLTESRRLIEIDMEKFKTIEKLMKTKQFSTEALSNPDKFDINN
FNKEIVETEEFQFIKTCIEELQLQLEKNEMIKNDENIDSTECENKISRLEFHILNLENLL
KLLTNEEITKETINDFKEDIKYYVENNEDPDFIEYDTIYEDMGCEVKKETMEEVNNDGNL
ESTNTASSSVTNTPSKLKNVDRNAFPKKSKSSTTLLNDNISNDSTTKLVKKKETTLESNK
NKEDSDKVSNIKFPEDMTQKIDEIIAADMANYEAFNNPLFKDELKYLLNAKRKLMQPYAK
MPDTMIQQLESSLLNCPDSLDADTPIYYKKPLSLPHPTSVFFPNEPIRFVCPMDVQPQQR
LSAENTENSNKINENNADEDNIEVNDIYSRTSLAKIFRKFDLDTLFFIFYHYQGTYEQFL
VARELSKCRNWKYNKVDRNWYFKEVTKSAPDMAQTEEETWRYFDYQNSWLARRCNHDFQY
REEEFEKL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaagaaaattacaacaagaggtcgataaattgttaaagaaagttaaagaaggc
ttggaagagtatgacttgatacatgataagttccaagcgagtgatcctgacaatacttca
tatagagagaaattggaatcagatttaaaacgagagattaaaaaattacaaaaacataga
gatcaaattaagacatggttgagtaaagaagatattaaggataaagtgcaacaattgaca
gagagtagaagactgattgaaattgatatggagaaatttaaaactattgaaaaattgatg
aaaacaaaacaattttccactgaagctttaagtaatccagataagtttgatattaataat
ttcaataaagaaattgtagaaactgaggaatttcaatttattaaaacatgcattgaggaa
ttacaacttcaattggagaaaaatgaaatgattaagaatgatgaaaatatagattctact
gaatgtgaaaataaaatttcaagattagaatttcatatattaaatttagaaaatctttta
aaattattaacaaatgaagaaataactaaagaaactattaatgatttcaaagaagatata
aaatactacgttgagaacaatgaagatccagatttcattgaatatgataccatttatgaa
gatatgggttgtgaagttaagaaagaaacaatggaggaagttaacaatgatggtaacctt
gagtcaaccaatacagcatcctcgagtgttacaaacactccttcaaagcttaaaaatgtc
gatagaaatgctttcccaaagaaatcgaaatcatcaacaactttattaaatgacaatatc
agtaatgattcaacaacaaaattagtcaagaagaaggaaacaactttggaatcaaataaa
aataaagaagacagtgataaagtatcaaatattaaatttcccgaagatatgacacaaaag
attgatgaaattatcgcagcagatatggcaaattacgaagcattcaataatcctctattt
aaagatgaattgaaatatttattaaatgctaaaaggaagttaatgcaaccatatgcaaaa
atgccagatactatgatccaacaattggagtcatcactattgaattgtcctgattcattg
gatgcagacactccaatttattataagaaaccattgtctttgcctcatccaacatcagta
ttttttccaaatgaaccaattagatttgtgtgcccaatggacgtccaacctcagcaacgt
ttgagtgcagaaaatactgaaaattcaaataaaataaatgagaataatgctgatgaagat
aacatagaagtaaatgatatatattcaagaacttcattggctaaaatattcaggaaattc
gatctggacactttatttttcattttctatcattatcaaggtacttacgaacaattttta
gttgcaagagaattatcaaaatgtagaaattggaaatataataaagtggatagaaattgg
tattttaaagaagtcactaaatctgcaccagatatggcacagactgaagaagaaacatgg
aggtatttcgattaccaaaatagttggttagcaagacgttgtaatcatgattttcaatat
agggaggaagaatttgaaaaattataa
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