Tetrapisispora phaffii: TPHA_0A03670
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Entry
TPHA_0A03670 CDS
T02235
Symbol
TPHA0A03670
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03022
Basal transcription factors
tpf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TPHA_0A03670 (TPHA0A03670)
09124 Replication and repair
03420 Nucleotide excision repair
TPHA_0A03670 (TPHA0A03670)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0A03670 (TPHA0A03670)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0A03670 (TPHA0A03670)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TPHA_0A03670 (TPHA0A03670)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TPHA_0A03670 (TPHA0A03670)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
DUF7385
Sua5_C
Motif
Other DBs
NCBI-GeneID:
11532555
NCBI-ProteinID:
XP_003683877
UniProt:
G8BNG5
LinkDB
All DBs
Position
1:complement(802879..803913)
Genome browser
AA seq
344 aa
AA seq
DB search
MDAISDPAFQNTQIHSLNSDETPSLLTVIIDTSPRLWAELDGDMKEDGSIIKVLRSMLVF
LNAHLATNNANKVAVIAAHSQGIKYLYPINTSHANKNKTNEISTSKKDLAIINPNMYRQF
RNVDESLVEEIYKIFQKEKAEYLEKPKQKSTLAGAMSAGLTYINRIVKNEENYTLKSRLV
VITCGGNAYTDNKVEEVIQYIPIMNCIFSATKMKCPIDVVKIGGSSESTFLQQATDATSG
IYLYVKDYHGLIQYLLTAMFIEPSLRSTIVKPNSKSIDFRTSCYITGKVVAVGFICSICL
CVMSILPPNNKCPACDSVFDEKVIVKLKRKPIIPGMVKKVTKNK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatgctattagtgatccagcttttcaaaacacacagattcattctttgaatagtgat
gaaacaccttccttattgactgtgattattgatacttctcccagattatgggcagagtta
gatggagatatgaaggaagatggatctattatcaaggttttaagatccatgcttgtattt
ttgaatgctcatttagcaacaaataatgctaacaaagttgcagttattgctgctcattca
caaggtattaaatatttatatcctattaatactagtcatgctaataaaaacaagactaat
gaaataagtacaagtaagaaagatttggcaattattaacccaaatatgtatagacaattt
agaaatgttgatgaatctttggtggaagagatatacaagatttttcaaaaagaaaaagct
gaatatttggagaaaccaaagcaaaaaagtacactagctggggcaatgtctgctgggttg
acatatataaatagaatagttaaaaacgaagagaattatactttgaaatctaggcttgtg
gttataacatgtggaggaaatgcatatactgataataaagttgaagaagtaatacaatac
attccaattatgaattgtattttctctgctacaaaaatgaaatgtcctattgatgtggta
aagataggtggcagttcagaatctactttcttacaacaggcaactgacgcaacaagcggt
atatacttatatgttaaagattatcatggactaatccagtatcttttaactgccatgttc
attgagccatctttgagatcaaccatcgtgaagccaaatagcaaaagtattgactttaga
acttcatgttatattactggtaaagttgtggcagttgggtttatttgttctatttgttta
tgtgtaatgtcaatcttaccaccaaacaacaaatgcccagcatgcgattcagtattcgat
gagaaggtcatagtcaaactaaaaagaaaaccaataatacctggtatggttaagaaagtt
accaagaataaataa
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