Tetrapisispora phaffii: TPHA_0A04350
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Entry
TPHA_0A04350 CDS
T02235
Symbol
TPHA0A04350
Name
(RefSeq) rRNA methyltransferase NOP1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TPHA_0A04350 (TPHA0A04350)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0A04350 (TPHA0A04350)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
TPHA_0A04350 (TPHA0A04350)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
FtsJ
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
11532734
NCBI-ProteinID:
XP_003683943
UniProt:
G8BNN1
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All DBs
Position
1:978408..979424
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AA seq
338 aa
AA seq
DB search
MSFRPGSRGGSRGGSRGGFSRGGGDRGGSRGGFSRGGGDRGGRGGFSRGGGRGGRGGFSR
GGGDRGGRGGFSRGGGRGGRGGARGGAAGGARGGARVVIEPHKHAGVFIARGKEDLLVTK
NMAPGESVYGEKRVSVEEPSKEDGVPPTKVEYRVWNPFRSKLAAGIMGGLDELFIAPGKK
VLYLGAASGTSVSHVSDLVGPEGVVYAVEFSHRPGRELISMAKKRPNVIPIIEDARHPQK
YRMLVGMVDAVFADVAQPDQARIIALNSHMFLKDQGGVVISIKANCIDSTVDAETVFARE
VQKLREERIKPLEQLTLEPYERDHCIVIGKYMRSGLKK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcagaccaggttctagaggtggttcccgtggtggttccagaggcggtttctcc
agaggtggaggtgaccgtggtggttccagaggtggcttctccagaggcggcggtgaccgt
ggcggcagaggcggtttctccagaggcggtggcagaggtggccgtggtggtttctccaga
ggtggaggcgaccgtggcggcagaggtggcttctccagaggcggtggtagaggtggccgt
ggtggtgcccgtggtggtgctgctggtggtgccagaggtggtgccagagttgtcattgaa
ccacataagcacgctggtgtcttcattgctagaggtaaagaggatttattagttaccaag
aacatggccccaggtgaatctgtttacggtgaaaaaagggtttctgttgaagaaccttct
aaggaagatggtgttccaccaactaaagtcgaataccgtgtctggaatcctttcagatcc
aagttggctgccggtatcatgggtggtttagatgaattattcatcgccccaggtaagaaa
gttctatatctaggtgctgcttccggtacttctgtctcccacgtctccgatttagtcggt
ccagaaggtgttgtctacgccgtcgaattctcccacagaccaggtagagaattgatctcc
atggctaagaagagaccaaatgtcattcctatcattgaagatgctagacacccacaaaaa
tacagaatgttggtcggcatggtcgatgccgtctttgcagatgttgctcaaccagatcaa
gcccgtattattgctttaaattctcatatgttcttaaaagaccaaggtggtgttgttatc
tccatcaaggctaactgtattgactccaccgtcgatgctgaaactgttttcgctagagaa
gtgcaaaaattacgtgaagaacgtattaaaccattagagcaattgacattagaaccttat
gaaagagatcattgtattgttattggtaaatacatgagaagtggtttaaagaaataa
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