Tetrapisispora phaffii: TPHA_0A05400
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Entry
TPHA_0A05400 CDS
T02235
Symbol
TPHA0A05400
Name
(RefSeq) hypothetical protein
KO
K12828
splicing factor 3B subunit 1
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TPHA_0A05400 (TPHA0A05400)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpf03041
]
TPHA_0A05400 (TPHA0A05400)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0A05400 (TPHA0A05400)
Spliceosome [BR:
tpf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
TPHA_0A05400 (TPHA0A05400)
Complex B
TPHA_0A05400 (TPHA0A05400)
Complex C
U2 SnRNP specific factors
TPHA_0A05400 (TPHA0A05400)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
TPHA_0A05400 (TPHA0A05400)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT
HEAT_ECM29
HEAT_EF3_N
XMAP215_CLASP_TOG
mTOR_dom
MMS19_C
Cnd1
CLASP_N
UTP20
CDH
Motif
Other DBs
NCBI-GeneID:
11532601
NCBI-ProteinID:
XP_003684048
UniProt:
G8BNY6
LinkDB
All DBs
Position
1:1220457..1223390
Genome browser
AA seq
977 aa
AA seq
DB search
MDQFGQSKHQLGADYSISQKIKDDFINNEGSPNDSEDILMKNQKDRSIYAKEDGYHKKRL
NISGNDDTKKNEGEQVGDKRRLSEDSTSIDKFKSAANERKRGRKVHSNVQSYEVPNESHL
VLQEYKADIEIERPDLRFLKESDKVLFKDVLTTENKFNEEDKDTKLSTAEINERNLINLL
LKIKNGNTSVRKVSMRTLSDKAVDFGPKLIFDKILPILLDRSLEDQERNLMIKVIDRVMY
QLGDQIRPYAKNILKVISPLLIDEDKITRATGTDIISNLTNAVGFNTMILTIRPDIENED
EYIRNISSRALAIVGKAVGVSQLIPFLHAVCHSKKAWRARHTGSRVIQHLSILMGIGILP
YLNELIKAMENGLKDEHINIRMATANALTSLAQQCYPYGIDSFNIVLEPLWKGIRSHKGK
ILASFLKCLASIIPLMDSDYASYYMREVMRIVQREFSSPDEEMKKAVLLILQKCSQIPSV
TTAYLKEEIAPNFFKQFWTRRTALDKQLNKAVTFTTVKLSTKLGGAYTIEHLLKPLKDEA
EPFRLMTTHAVERVVSQLGTDDLSDSQENRLIDSLLIAFQEQSNNNKIVIQCFGTVANSL
NTRMKPYLAPIVSAFLNSLKNRTPFVRENAAELCKSFIPVIKNCNEVSMLNKLNVILFES
LGEVYPEVLGSIIGAMHQICANVPLDILQPPIGQILPTLTPILRNNHKKVQINAIKFVGM
VAEMSPESVPPKEWMRICFILLEILRSPNKAIRRSTNNTFGLIAKAIGPTDILATLLDNL
KVQERQLRVCTAVAIGIIAKVCGPYTVIPVLMNEYKTPETNVQNGILKAMSFMFEYIGND
ARDYIYLMLPLLEDALTDRDLVHRQTASEVIRHMALNCDVHGYEDAFIHLLNLLMPNIYE
TSPHVIIRILDALESLNVALGPGVFMNYVWAGLFHPAKKVRNAFWKLHNKCYIQKADSLV
PYYPRKTLDIEEFDIVL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatttggccagagcaagcatcaattaggtgcagactattctatctcacagaaa
ataaaagatgactttattaataatgaaggctcacctaatgacagtgaggatatcttaatg
aaaaatcagaaggatagatctatatatgcaaaggaagatggttaccacaagaagagacta
aatatcagtggaaatgatgatacaaaaaaaaatgagggagaacaagttggggacaaaaga
agattaagtgaggacagtacatcgatagataaatttaagtcagctgcaaatgaaagaaaa
agaggccgtaaggttcactcaaatgtacaaagttatgaagtaccgaatgagtcgcatctg
gttctacaagaatataaagccgacatcgaaatagaaagaccagatttgagattcctgaaa
gaatcagataaggtactcttcaaagatgtattaaccacggaaaacaaatttaacgaagag
gataaggatacaaaactatccaccgctgaaataaatgaaaggaatcttattaatcttctt
ctaaaaattaaaaatggtaatacatctgtaagaaaagtgtcaatgagaacattatccgat
aaagctgttgattttggacccaagttaatttttgacaaaattttaccaatcttattggat
agatccttggaagaccaagaaaggaatttaatgataaaagttattgatcgtgtcatgtat
caattaggagaccagatacgtccatatgcaaaaaatattttaaaagtaatctcacctcta
ttaattgatgaagataaaattacaagagcaacaggtactgatatcatatctaatttaact
aatgcggttggttttaatacaatgattttaacaattagaccagatatagagaatgaggat
gaatatatcagaaacatttcatcaagagcactggcaatagttggtaaggcggtaggtgtt
tcccagctaataccgtttcttcatgctgtatgtcattctaaaaaggcttggagagctaga
cacacaggttcaagagttatccaacacttgtcgatattaatgggtattggtattttgcct
tatctaaatgagttaataaaggcaatggaaaatggcttaaaggatgaacacattaatatt
agaatggccactgccaatgcactaacctcccttgcacaacaatgttatccttatggtata
gattcatttaatatagttctagaaccattatggaaaggtatacgatcgcacaaaggaaaa
attttagcgtcatttttgaagtgcttggcatcaataatcccgttaatggattctgactat
gcgtcttattacatgagagaagtgatgagaattgtacaaagagagttcagttcacccgat
gaagagatgaaaaaggctgtattattaatattacaaaaatgttcccagataccgagtgtc
acaactgcatatttaaaagaagaaattgctcctaattttttcaaacaattctggacaaga
agaacagctttagataagcaattaaataaggctgttacttttaccacagtaaaattgtcc
acaaaattaggtggtgcatatacaattgaacacttactaaaaccattaaaagatgaagca
gagccttttagactaatgacaacacatgcggtagaaagagtagtatcacaactcggtacc
gatgatttatcagacagtcaagagaatagattaattgattcattgttaattgctttccaa
gaacagtcaaataataataagatagttattcagtgttttggaactgttgctaattcatta
aataccagaatgaaaccttatctggcacctattgtcagcgcatttttgaatagcttaaaa
aatagaactccttttgttcgtgagaatgctgctgaactatgtaagtcttttattcctgtt
ataaaaaactgcaatgaagtctcaatgttaaataaattgaatgtcattctattcgaatca
ttaggagaagtatacccagaagtattaggttcaattattggtgcaatgcaccaaatatgt
gcgaacgttccattagacatattacaaccacctataggccaaattctaccaacgttaact
ccaattctgagaaacaaccataaaaaagtccaaataaatgctataaagtttgtgggcatg
gtagccgaaatgagcccagaatctgttcctccaaaagaatggatgagaatctgttttatt
ttgttggaaatcttgaggagtccaaacaaggccattcgaagatctactaataacacattt
gggttgattgcaaaagcaattggcccaactgacatcctagcaactcttttagacaattta
aaggtacaagaacgtcaacttcgtgtttgtactgctgttgccattggtataatagctaag
gtatgtggtccgtataccgtaataccagtattaatgaatgaatataagacaccagaaaca
aatgttcaaaatggtattctaaaggcgatgtcgtttatgtttgagtatataggtaatgat
gcacgtgattatatatatttgatgttaccattactggaagatgcactaacagatagagat
ttagtacaccgacagacagcctctgaagtcataagacatatggctttaaattgtgatgtt
catggttatgaggatgcttttattcatctattgaatttgttaatgccaaatatatatgaa
acttcaccgcatgttataattcgtatacttgatgctctagaatcattaaatgttgcattg
ggacctggtgtcttcatgaattatgtttgggctggtttatttcatcctgcaaagaaggta
aggaatgctttttggaaattacataacaagtgttatattcagaaagccgattcattagtc
ccttattacccgagaaaaactttggatatagaagagtttgacattgtcctatag
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