KEGG   Tetrapisispora phaffii: TPHA_0A05850
Entry
TPHA_0A05850      CDS       T02235                                 
Symbol
TPHA0A05850
Name
(RefSeq) hypothetical protein
  KO
K12601  superkiller protein 8
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TPHA_0A05850 (TPHA0A05850)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0A05850 (TPHA0A05850)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     TPHA_0A05850 (TPHA0A05850)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_ELP1_1st NBCH_WD40 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 11532308
NCBI-ProteinID: XP_003684093
UniProt: G8BP31
LinkDB
Position
1:1327076..1328374
AA seq 432 aa
MSKIFISTVNCGKAHDADIYGVTISNPFTVTCSGDGFVKLWFNNLLDNETPKERMVSQFV
HKTGVHHVDIFHSVERTGVEFYIISCVSFSGEIFFYSVNTKNGEMSALELLTKDEMKKSF
WAVKWLKSDDKTLNHRFAATDVKGNTYIWKFHPFEQEIDDVEEMKKKLAKEKADKRRTNN
RNTPNKDEDNQAEEIEEDQGPIAVKPHLVLQGVIEPSAPNFATAIDMSIKGLIATGFSSG
SVVIAQLTTLRPIYTFEGFGIQGIEQNSNTVRALKFSPTGNLLAAANDSGSYGCVSLFET
DYGERVGDFTVPSHSNQASIGSYAHSGWVFDLSFNPTGNFLATCGYDSKVRVWDVKTKER
VSTLNLSADDIENEEEILLEDELGDSLKRPPVMGVTYIDKGVRSGLGNDTNEGLACVCLD
RSVRWFREAGGS
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgtcaaagatcttcatttctactgtcaattgcggtaaagctcatgatgctgatatttat
ggagttactatttccaatccattcactgttacatgttcaggagatggatttgtaaagtta
tggtttaataacttactagacaacgaaacaccaaaggaacgtatggtttctcaatttgtg
cataagacaggtgttcatcacgtagatatttttcattccgttgagagaactggggtggag
ttttatattatctcttgtgtaagcttctcaggtgaaatttttttctactcagttaataca
aaaaacggtgaaatgtcagcattagaactgctaacaaaagatgagatgaagaaatccttc
tgggctgtaaaatggctgaaaagtgatgataaaactttaaaccatagatttgctgctaca
gatgtcaaaggtaacacatatatttggaaatttcacccattcgaacaggaaatagatgat
gttgaagaaatgaaaaaaaaacttgcaaaggaaaaagctgataaaagaagaacgaataat
agaaacacaccgaataaagatgaagataatcaagcagaagaaattgaagaagatcaaggt
ccaatagctgtaaaacctcatttagttttacaaggcgtgattgagccaagtgcgccaaac
tttgctaccgctattgatatgtcaattaaaggtttaatagcaacaggattttcatcaggt
tccgtcgtaattgctcagctaacaactttgagaccaatatatacttttgaagggtttggt
attcaaggtatcgaacagaatagcaatacagtacgagctcttaaattttctcctacagga
aacttattagcagctgcaaatgattctggttcttatggctgtgtaagtttatttgaaact
gattatggagaaagagttggagattttactgtgccttcccatagcaaccaagccagtatc
ggttcatacgcccacagcggttgggtatttgatctttcattcaacccaacaggtaacttt
ctagccacatgtggctatgacagtaaagtcagggtctgggatgtgaaaacaaaagaacgt
gtttccactttaaacctttctgctgatgacattgaaaatgaagaagaaatccttctagaa
gatgaattaggagattccctaaagagaccacctgtgatgggtgtcacttacatagacaaa
ggtgtaagatcaggacttggtaatgatacgaatgaaggtttggcttgtgtatgtctcgat
agaagcgtaagatggttcagggaagccggcggtagttga

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