Tetrapisispora phaffii: TPHA_0B01170
Help
Entry
TPHA_0B01170 CDS
T02235
Symbol
TPHA0B01170
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0B01170 (TPHA0B01170)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0B01170 (TPHA0B01170)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TPHA_0B01170 (TPHA0B01170)
mRNA degradation factors
5'-3' decay
Lsm complex
TPHA_0B01170 (TPHA0B01170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
11535000
NCBI-ProteinID:
XP_003684223
UniProt:
G8BP58
LinkDB
All DBs
Position
2:complement(264835..265308)
Genome browser
AA seq
157 aa
AA seq
DB search
MMSQKKDSKKITEGEADLYLDQYNFTTTAAIVGSVDRKVFVLLRDGRILFGVLRTFDQYA
NLILQYCVERIYFTEENKYAEELRGVFMVRGENVVMLGEVDIDKEDKPLEMMEKIPFKEA
LKIQKEQNQQKCKLETQKSKDMAAYGLVHDFHKSDMY
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccaaaagaaagactccaagaagattactgaaggtgaagctgatttatatttg
gaccaatataacttcaccacaacagctgctatcgttggttcggttgaccgtaaagtgttt
gtcctgttacgtgacggtaggatactatttggtgtgttgagaactttcgatcaatatgct
aatttgatattgcagtattgcgtggagaggatctatttcactgaagagaataaatacgca
gaagaactaagaggtgtgttcatggtacgtggtgagaatgttgttatgttgggggaagtt
gatatcgataaggaagataaaccattagaaatgatggaaaaaatcccatttaaagaagct
ttgaaaattcaaaaggaacagaatcaacaaaagtgtaaactggaaactcaaaagagtaaa
gacatggcggcgtatggtttggttcatgatttccacaaatctgatatgtactaa
DBGET
integrated database retrieval system