KEGG   Tetrapisispora phaffii: TPHA_0B01170
Entry
TPHA_0B01170      CDS       T02235                                 
Symbol
TPHA0B01170
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TPHA_0B01170 (TPHA0B01170)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0B01170 (TPHA0B01170)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TPHA_0B01170 (TPHA0B01170)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     TPHA_0B01170 (TPHA0B01170)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 11535000
NCBI-ProteinID: XP_003684223
UniProt: G8BP58
LinkDB
Position
2:complement(264835..265308)
AA seq 157 aa
MMSQKKDSKKITEGEADLYLDQYNFTTTAAIVGSVDRKVFVLLRDGRILFGVLRTFDQYA
NLILQYCVERIYFTEENKYAEELRGVFMVRGENVVMLGEVDIDKEDKPLEMMEKIPFKEA
LKIQKEQNQQKCKLETQKSKDMAAYGLVHDFHKSDMY
NT seq 474 nt   +upstreamnt  +downstreamnt
atgatgagccaaaagaaagactccaagaagattactgaaggtgaagctgatttatatttg
gaccaatataacttcaccacaacagctgctatcgttggttcggttgaccgtaaagtgttt
gtcctgttacgtgacggtaggatactatttggtgtgttgagaactttcgatcaatatgct
aatttgatattgcagtattgcgtggagaggatctatttcactgaagagaataaatacgca
gaagaactaagaggtgtgttcatggtacgtggtgagaatgttgttatgttgggggaagtt
gatatcgataaggaagataaaccattagaaatgatggaaaaaatcccatttaaagaagct
ttgaaaattcaaaaggaacagaatcaacaaaagtgtaaactggaaactcaaaagagtaaa
gacatggcggcgtatggtttggttcatgatttccacaaatctgatatgtactaa

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