Tetrapisispora phaffii: TPHA_0B02080
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Entry
TPHA_0B02080 CDS
T02235
Symbol
TPHA0B02080
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TPHA_0B02080 (TPHA0B02080)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0B02080 (TPHA0B02080)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TPHA_0B02080 (TPHA0B02080)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
NBCH_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_LRRK2
Beta-prop_SCAP
PQQ_2
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_VPS8
Beta-prop_TEP1_C
eIF2A
TNP-like_RNaseH_C
CPSF_A
Motif
Other DBs
NCBI-GeneID:
11534918
NCBI-ProteinID:
XP_003684314
UniProt:
G8BPE9
LinkDB
All DBs
Position
2:477775..480600
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AA seq
941 aa
AA seq
DB search
MSTMIEQKKRKLSSAIVAARRDPSKIFSPYRVIGNVSNYVPFSVGTLGSTFYIVTSVGKS
FQIYDANNLHLLFVSEKELDNPITAFATHFHYVYVGSGNKVFVFKRGIQEYEIELKANAR
VKSVCVFGDFLCASAEDGILYIYKKKNASAKYPTEYYSQFQVTELLGGDIVSIIHLPTYL
NKIVIITKSNLLLINVRTGKLLFQSQEFPNNITTACDAPALDIIALGTNAGQLMMYNIKK
GKVIRNINIPKSHISSISFRTDGAPHMSVGCTNGDLIFYDLDRRSRIHVIKNAHKESLGG
VMKAMFLNGQPIIVTSGGDNSLKEFVFDPSLSQADGETVVQPPRLLRSRGGHSQPPSCIQ
FADSSAHMLLSSSRDRSLWSFSLRKDAQSQELSQRLHKNSNGDRLAGGSVREKFPEILSM
AIENSRLGEWENVITAHKDEKSARTWDMRNKRVGRWTFNTTDDGFAKSVALSQCGNFGLV
GSSNGSIVVYNMQSGLIRRKYKLHKKAVTGIAIDGMNRKMVSCGLDGIVGFYDFNKATLL
GKLVLDSSISSMVYHRSSDLIALVLDDLSIVVIDTITQKIVRQLWGHSNRITSLDFSPDG
RWIVSTSLDSTLRTWDLPTGNCIDGVKLENVATNIQFSANGEFIATSHVVGNGICLWTNK
SQFKSISTRAISEDEFRNIMLPNNSASGNSNIIEGALDVSNDDELDIDFTNYESLSQINE
DLITLSVGPRNKLNTLLNLDIIKQRSKPTEAPKKPEKASFFLQLTGDKIGDEASTREGVV
DTSALESAESESKLNEAGAAEQELQKFKPRGHVELESQFTKLLRECSKQNNYSKFLEYLI
KLSPSLIDIEIRGLDSFEPFNEIIFFINALTSGLKSKRNFELYEAFMSILFKVHGDVLHS
NNTNANISEALEKWDIVHSECNKLDDLLKYCSGVLNFISSN
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccatgattgaacaaaagaagagaaagttgagttcagcaattgttgccgctaga
agagatccatcaaagattttttctccatacagagtaattggtaatgttagtaattacgtt
ccattttctgtaggtacattaggttcgactttttatattgttactagtgttggaaaaagt
ttccaaatttatgatgctaataatttgcatttactatttgtctctgaaaaagaactagac
aacccaattactgcttttgcaactcacttccattacgtatatgtaggatccggaaataag
gtgtttgtcttcaaaagaggtattcaagaatatgaaatcgaactaaaggcaaatgcgaga
gtcaaatcagtttgtgtatttggggactttttatgtgcatcagcagaagatggcatactt
tatatctacaaaaagaaaaatgcttctgctaagtatcctactgaatactactctcaattc
caagttacagagctgctaggaggcgacattgtatcaatcatacatttaccaacttatttg
aataaaattgtcattattacaaaatccaatttattattaattaatgtaagaacaggtaaa
ttattgttccaatctcaagagttccctaacaatataacaacagcatgtgatgctccagcc
ttagatataattgcgcttggtaccaatgcgggtcaacttatgatgtataatataaaaaaa
ggtaaagtaataagaaatatcaacattccaaaatcacatatttcctccatatcattcaga
acggatggcgcaccacatatgtctgtaggttgtaccaatggtgatttaatattttatgat
ttagatcgtcgttcccgtattcatgttattaagaatgcccataaagaatccttaggtggc
gttatgaaagctatgtttttaaatggtcaacctataatagtaacttctggtggtgataac
tctttgaaagaatttgtttttgacccatctctttctcaagctgacggtgaaactgttgtt
caaccaccaagattgttacgttctagaggtgggcattcacagcctccttcctgtattcaa
tttgcagactcaagtgcacacatgttgttatcatcatctagagatagatctctttggtca
ttttcattgagaaaggatgcacagtcacaagaattatcacaaagacttcataaaaattcg
aatggtgatcgattagcaggtggttctgtcagggagaaatttcctgaaattttatccatg
gctattgaaaactcgagattaggtgaatgggagaatgttattacagcacataaagatgaa
aaatctgctcgtacatgggatatgcgtaataagagagtaggcagatggactttcaatacc
acagatgatggatttgctaaatctgttgctttatctcaatgtggcaattttggccttgtt
ggatcttcgaatggtagcattgtggtttataatatgcaaagtggtcttatccgtagaaaa
tataaacttcacaagaaagcagttactggcattgctattgatggtatgaatagaaaaatg
gtatcttgtggtttagatggtattgttggtttttatgattttaacaaagctacattatta
ggtaaattggtactggattcctcgatttcatccatggtttaccatcgttcatctgattta
attgcactagttctagatgatttatcgatagtcgtgattgacacaataacacaaaaaatc
gtccgtcagctatggggtcattccaatagaattacctctttagatttttcaccagatggc
cgttggattgtttctacatctctagattctactcttagaacttgggatttgccaactggt
aattgtatcgatggtgtaaaacttgaaaatgtagccacaaatattcaattttctgctaac
ggtgaatttattgctacttcgcatgttgttggtaatggtatttgtttatggactaataaa
agtcagtttaaatctatatcgactagagctatttcagaagatgaattcagaaatataatg
ctacctaataactccgcatctggaaattctaatattatcgaaggtgcattagatgttagc
aacgatgatgaattagatatagattttacaaactacgaatcactttctcagataaatgag
gatttgatcacattgtcggttggcccaaggaataaattgaatacattgttgaatcttgat
attattaaacaaaggtctaaaccaactgaggctcctaagaaaccagaaaaagcttcgttc
tttttacaattaactggtgacaaaattggtgacgaagcttctactagggaaggtgttgtg
gatacttccgccctagaatctgcggaaagtgagtctaaattaaacgaagcaggggcagct
gaacaagaattgcagaaattcaagccaagaggccatgttgagttggaatcccaatttact
aagttattacgtgaatgttctaagcaaaacaattatagtaaattcttagaatatttaatt
aaactatccccatctttgatagatattgaaatcagaggtcttgattcatttgagccgttt
aatgaaattatattcttcatcaatgctttgacaagtggtttaaaatctaaacgcaacttt
gagttatatgaagcatttatgagcatattatttaaagttcatggtgatgtattacattca
aataatacaaatgccaacatttctgaagcattagaaaagtgggatattgttcactctgaa
tgcaacaaattagatgacttattaaaatattgttctggtgtattaaattttatttcaagt
aattaa
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