Tetrapisispora phaffii: TPHA_0B02590
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Entry
TPHA_0B02590 CDS
T02235
Symbol
TPHA0B02590
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TPHA_0B02590 (TPHA0B02590)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpf03041
]
TPHA_0B02590 (TPHA0B02590)
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0B02590 (TPHA0B02590)
Enzymes [BR:
tpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TPHA_0B02590 (TPHA0B02590)
Spliceosome [BR:
tpf03041
]
Complex A
U2 snRNP components
U2 related factors
TPHA_0B02590 (TPHA0B02590)
Complex B
TPHA_0B02590 (TPHA0B02590)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
TPHA_0B02590 (TPHA0B02590)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
90S particles
Helicases
TPHA_0B02590 (TPHA0B02590)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
Flavi_DEAD
SRP54
ResIII
AAA_23
nSTAND3
AAA_30
AAA_7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
11535075
NCBI-ProteinID:
XP_003684366
UniProt:
G8BPK1
LinkDB
All DBs
Position
2:594210..596540
Genome browser
AA seq
776 aa
AA seq
DB search
MTEAIGTKRRLSNTSGHPDPVATSIPEHAAEAAEEYSKTHPAPPKEPLIHHDAGEFNGLT
RHNTTAAQAEVLEDSKVNPFTGNEFSSKYFGILKTRRDLPVHAQRDEFLKIYQQNQIMVF
VGETGSGKTTQIPQFVLFDEMPHLLNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGY
SIRFENKTTNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKEV
IKRRSDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVEIYYTPEFQRDYLDSAIRTV
LQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLIREEGCGPLSVYPLYGSLPPHQQQ
RIFEPAPESHNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVS
PISKASSQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGV
DDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSS
EFNCSQEILTIVAMLSVPNVFMRPPKDRKRADDAKNAFAHPDGDHITLLNVYHAFKSDEA
YEAGIKKWCRDNFLNFRALSAADNIRAQLERLMIRHNLDLNTTDYESSKYFDNIRKALAS
GFFMQVAKKRSGGRGYITVKDNQDVLIHPSTVLGHDAEWVLYNEFVLTSKNYIRTVTSVR
PEWLVKLAPAYFELDNFQNGDVKLSLERVQEKVQRMDELNSEKSSKHSKKSKKEKH
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggcgattggcaccaagagaaggttatccaataccagtgggcacccagatcct
gtcgctacttcgatcccagaacatgccgctgaagcagctgaagaatattcaaagactcac
ccagctcctccaaaggaacctttaattcatcacgatgcaggtgagttcaacgggttaaca
cgccataacactacagcggctcaagcagaggtattagaagattctaaagttaatcctttt
acaggtaatgaattttcatcaaaatattttggtattttaaagactagacgtgacttgcct
gttcatgctcaaagagatgaatttttaaaaatttatcaacaaaatcaaattatggttttt
gttggtgaaacaggttccggtaagactacacaaattccacaatttgttttattcgatgaa
atgccacacttactaaatactcaagttgcatgtacccaacctcgtcgtgtggccgcaatg
tctgttgctcaaagagttgccgaagaaatggatgtcaaattaggtgaagaagttggttac
tccattagattcgaaaataaaacaactaacaagaccattttaaaatatatgactgatggt
atgcttctaagagaagctatggaagaccatgacttaaaacgttactcttgtattatctta
gatgaagcgcatgaacgtactttagccactgatatattaatgggtttattaaaagaagtc
attaagagaagatctgatctaaagatcattattatgtctgctactttagatgccgagaaa
ttccaacgttactttaatgacgctccactattagctgtcccaggtagaacttacccagtt
gaaatttattacactccagaatttcaaagagattatctagattccgcaattcgtactgtt
ttacaaattcatgcaactgaagaggctggtgatatattattatttttaacaggtgaagac
gaaattgaagatgctgtcagaaaaatatctttagaaggtgatcaattaataagagaagaa
ggttgcggcccattgtccgtttatccactgtacggttctttaccaccacaccaacaacag
cgtattttcgaacctgctcctgaatcacataatggtagaccaggtagaaaggttattatc
tcaactaacattgctgaaacttcattgaccattgatggtatcgtttatgttgttgatcca
ggtttttctaaacaaaaagtttacaatccaagaatcagagttgaatcactattggtttct
ccaatttccaaagcttcttcgcaacaaagagctggtcgtgctggtcgtactagaccaggt
aaatgttttagattatacactgaagaagctttcaagaaggaattaatcgagcaaagttat
cctgagattttacgttctaatttatcatcaacagttttggaattaaaaaaattaggggtt
gatgatttggttcattttgattttatggatccaccagcccctgaaactatgatgagagct
ttagaagaattaaattatttagcctgtttagatgacgaaggtaatttaaccccattaggt
agattggcatcccaatttcctttggatccaatgcttgcagtaatgttgattggttcttca
gaatttaattgttcgcaagaaatactaaccattgttgctatgttatcagttccaaacgta
ttcatgcgtcctcctaaggatagaaaacgtgctgatgatgctaaaaatgcatttgctcat
ccagatggtgaccacattaccttattaaatgtttaccatgccttcaaatctgatgaagct
tatgaagctggtattaagaaatggtgtcgtgataacttcttaaacttcagagctttatct
gctgctgacaatatccgtgctcaattagaaagattgatgatacgtcataatcttgatttg
aataccactgattatgaaagttctaaatactttgataatattagaaaagctttggcttcc
ggtttctttatgcaagttgccaagaaaagatccggtggtagaggttatataactgtcaag
gataaccaagatgttttaattcatccaagtactgttttaggtcatgatgctgaatgggtt
ttatacaatgaattcgtactaacaagcaaaaattacataaggacagtcacatctgttaga
ccggagtggttagtaaaattagctcctgcatactttgaattggataattttcaaaatggt
gatgtaaagctttctttggaaagagttcaagaaaaggttcaaagaatggatgaactaaat
tctgaaaaatctagtaaacattctaaaaaaagcaagaaagaaaagcattaa
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