Tetrapisispora phaffii: TPHA_0B04380
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Entry
TPHA_0B04380 CDS
T02235
Symbol
TPHA0B04380
Name
(RefSeq) hypothetical protein
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03030
DNA replication
tpf03410
Base excision repair
tpf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPHA_0B04380 (TPHA0B04380)
03410 Base excision repair
TPHA_0B04380 (TPHA0B04380)
03420 Nucleotide excision repair
TPHA_0B04380 (TPHA0B04380)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0B04380 (TPHA0B04380)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0B04380 (TPHA0B04380)
Enzymes [BR:
tpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPHA_0B04380 (TPHA0B04380)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
TPHA_0B04380 (TPHA0B04380)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
TPHA_0B04380 (TPHA0B04380)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
11534963
NCBI-ProteinID:
XP_003684541
UniProt:
G8BQ26
LinkDB
All DBs
Position
2:complement(1020278..1026925)
Genome browser
AA seq
2215 aa
AA seq
DB search
MSNSNNSSYKGSTTARFVKNPGGANSQRNGFALSAQQLLQSGKVDEIDTMMGFERYIPPQ
FSGSIKNTKLQNIPGRVGWLVNMHPTVLSQDSIYSSSGSNSNVGVAGVDFYFLDEEGGSF
KSSVVYDPYFFITVTDDSRINDVEEFLKKYLESCLKNISVLIKDDLAKDNHLIGLKKTLI
KLSFVNSNQLFEARNLLRPILRDNANNRMQRNIYNQNNNNTAVEAQKVIEDIREYDVPYH
VRVSIDKDIRVGKWYKITSQGFFEHTDKVAFADPVVLAFDIETTKPPLKFPDAQLDQIMM
ISYMIDGDGYLITNREIISEDIEDFEYTPKQEYQGLFTIFNEVDEVGLLNRFFEHIREAK
PTVISTFNGDFFDWPFVETRSKIHGINMYDEIGFAADAEGEYKSSYCAHMDCYRWVKRDS
YLPQGSQGLKAVTQAKLGYNPIELDPELMTPYAYEKPQILSEYSVSDAVATYYLYMKYVH
PFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQNEIILPNKHTDPIERFYDGHLLES
ETYVGGHVESLEAGVFRSDIPNKFTIDPNTVENLMEELTGAMKFSIEVECNSKIEDVTNF
EEIKADIANKLTDMKLNPQRDELPLIYHVDVASMYPNIMITNRLQPDSIKSERDCASCDF
NRPSKKCDRRLKWAWRGNFFPTKMDEYNMIKRALQNETFKNKNKMSKKPFLTFDELSYTE
QVEQIKKRLTDYSKKVYHKTKVSEIIERESIVCQRENPFYIDTVRSFRDRRYEFKGLAKT
WKGKMSSLDKDDFHGKEEAKKMIVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGIT
CLTGATIIQMARSIVDGIGRPLELDTDGIWCIIPKSFPENYTFTLRNGKKLFMSYPCSML
NYKVHQQFSNEQYQTLIDPIKKKYKVQKENSIFFEVDGPYKAMVLPTSKEEGKGIKKRYA
VFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKVFLEGDTLENCYKSVADVANRWLDIL
DTRGSMLEDEDLIELICENRSMSKTLKEYEGQKSTSITTAKRLGEFLGEEIVRDKGLQCK
YIISSKPINAPVTERAIPVAIFSSDIQIKRTYLRRWLQDPTLENFDPRSIIDWDYYRERV
ASVVQKIITIPAALQDVTNPVPRVEHPDWLKKKISTKTEKAKQSSLTRFFSKSNDNLEHR
KVNDIEDMFKDTNDELIEKFKVGKVMSRKFGGKRKRIQDKNENTAEENMVLPAEFPAIED
NYVGWLKYQKIKWKIQQKDRNRRNELFGNNNSSSGRNMLSSMIRKQAESYANSTWEIIQY
KKGDQPGELEVYVLINQKIQVLNFKIPKTLFIKFKNEEIPINKIKKCTVEKSNAMLPNNH
FLNEGKNGSLFKLTLPEKIYEAESEDPTSILNDEGVMGIFESTITSSERAIIELGSTVSF
SSNAMGALGRGLQKGFDMKSLSMSDNNRYLSSLPPGISYILHLVSDIGYEFFTVYKSWDK
TVRILTLKPSNHAQVLQPATIEQLYKTAYNKKKDDHYNHYRSINLTKDLNFEQFSYTDIT
KVYKKLSQILSDIKDEKGLQFLMLIQSPYIMKLLNFVKYLNQVPLIELASNELSLPQLNW
QTILSKIIVSNLVSSGSSLHTLITLSHYSNIPICNLKLHEMNFIIDVLYARKLKNEGIVL
WWNDKTPLPDYGGTQKEFDLNTSWIMNDLKFLEINNPDVYDNVTLELSINNLTVNTVLTS
AVISSIDGSDLAEVNSLMINNNNENGTGSSFVQDSFSTGSLSVLRSVLKSWWDQALKGDV
SADLLVNSFVSWVQNPDSKLFDGTLRYHVNNLTKKSLLQLINEFVSLGSSVVYADRNKLF
IKTSKTSPENCYAYGQYIVKAIRSSSSFCYLDLSVERYWDILIWMDKFNFSGLACNEITD
SETQEMSAYSQWQIKDFLPAIYQPEFDDWIMIILDSMVKSKDQYYESKAGTQRLTQLPIV
KDRNNDDDETGPLENYTKMFYQTLLQRVQKLFRNQQEFILDPQYKNDYIFPVVPGSHLNM
KNPLLEFVKFICQVMLLSTKTTLEVRELRKELLKIFEIREFEKKSEFQNPSSSLVINCFL
CEHCYHITDIDICKANIETVFSCERCEKPLAKQLFEDHLIQMLVSDFEAYYTQDPRCVKC
RRVKKDLMSEHCPCSGNWINTISQAELLQKVKIYNQVANHYNFIRLTSAITEVVQ
NT seq
6648 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatagcaacaatagttcatataagggatccacaacagctaggtttgttaagaac
cccggaggtgctaattcacaaagaaatggatttgctttgtctgcacaacaattgttacaa
tccggtaaagtcgatgagatcgataccatgatgggatttgaaagatacataccaccacag
ttcagtggttccattaagaatacaaagttacaaaatatcccaggcagagttggttggcta
gtgaatatgcatccaactgttttatctcaggactcaatttattcttcatcaggaagtaac
agtaatgtcggtgttgccggtgttgatttttactttcttgatgaagaaggcggtagtttc
aaatcatcagttgtttatgatccgtacttctttattactgttactgacgattcaagaatt
aatgatgttgaagaatttttgaaaaaatatttagaatcatgcttaaaaaatatatctgtt
ctgataaaggatgatttagcaaaggataatcatctaattggtttaaagaaaacattaatt
aaattgagcttcgtaaattcaaatcaactttttgaagcaagaaatttattaagacctata
ttaagagataatgcgaataatagaatgcaaagaaatatctataaccaaaataataacaac
acagctgtagaggcccaaaaagttatagaagacattagagagtatgatgtgccgtatcat
gtcagagtatccattgataaagatataagggtcggtaaatggtataaaataacgtcacaa
ggcttctttgaacacaccgataaagttgcatttgcagatccagtcgttttagctttcgat
atcgaaacaacaaaacctccattaaaattcccggatgcacaactcgatcaaataatgatg
atttcatatatgatcgatggagacggttatctaattacaaacagagaaattatttcagag
gatattgaggattttgagtatacaccaaaacaagaatatcaaggtttatttacaattttt
aacgaagttgatgaagtgggattattaaacagattttttgagcatataagagaggcaaaa
ccaactgttatctctacctttaatggtgacttcttcgattggccctttgttgaaacaaga
tcaaaaatacacggaattaacatgtatgatgaaattggttttgctgctgatgctgaaggt
gaatataaatcttcatactgtgcacacatggactgctaccgttgggtaaagcgtgattca
tatttaccccaaggttcacagggtttaaaagcagttactcaagcaaaattaggttataac
ccaattgaattagacccagaattaatgaccccttatgcatacgaaaaacctcaaatttta
tctgaatattctgtttctgacgctgttgcaacttattatctatacatgaaatatgtccac
cctttcatcttttccctttgtacaatcattccattaaatccagatgaaactctaagaaaa
ggtaccgggaccttatgtgaaatgttattaatggttcaagcataccaaaacgaaattatt
ctaccaaataaacatacagatccaatagaaagattttatgatggtcatcttctggaatca
gaaacctatgttggtgggcacgtggagtcactagaagcaggtgtttttagaagtgacata
cccaataaatttacgatagatccgaatactgttgaaaatttaatggaagaattaactggc
gctatgaagttctccattgaagtagaatgtaattcaaaaatcgaagacgtcaccaatttc
gaggaaataaaagcagatatagcaaataaattaactgatatgaaattaaacccacaaaga
gacgaattacctcttatttatcacgttgatgtcgcatctatgtatccaaacattatgatt
acaaatagattacaaccagatagtataaaatctgaaagagattgtgctagttgtgacttt
aataggcccagtaaaaaatgtgatagacgactcaagtgggcttggagaggtaactttttc
cctacaaaaatggatgaatataatatgatcaagagagccttacaaaatgaaactttcaag
aataaaaataaaatgtccaagaaaccatttttaacattcgatgaattaagttacacagaa
caagttgaacaaattaaaaaacgtttgacggattattccaaaaaggtataccacaaaacc
aaggtatcagaaattattgaaagagaatctattgtttgccaaagagaaaatccattttat
atagatacggtacgttcttttagagatagaagatatgaatttaagggcttggctaaaaca
tggaaaggtaaaatgtctagtttagataaagacgattttcatggtaaagaggaagctaaa
aaaatgatagttttatatgattctctacaattggctcacaaagttattttgaattccttc
tatggttatgttatgagaaaaggttcacgttggtactcaatggaaatggcgggtattact
tgtttgacaggtgcaacaattattcaaatggcaagatcaattgttgacggtataggacga
ccattggagttagatacagatggtatttggtgtattattccaaaatcattcccagaaaat
tatactttcactctgagaaatggtaagaaattatttatgtcgtacccatgttccatgttg
aattataaagttcatcaacaatttagtaacgaacaataccaaactctgatagatccaatt
aaaaagaaatataaagtacaaaaggaaaattccattttttttgaagtcgatggtccatat
aaagctatggttttaccaacatcgaaagaagaaggtaaagggattaaaaaacgttatgct
gttttcaacgacgatggttctttggcagaattaaaaggttttgagcttaaaagacgtggt
gagttacaattgattaaaaattttcaaagtgacatcttcaaagtatttttagaaggtgat
actttagaaaattgttataagtcagttgccgatgttgctaatcgttggttagatattttg
gatacgagaggttccatgttagaagatgaagatctgattgaattaatttgtgaaaataga
agtatgtctaaaacactaaaggaatatgaaggacaaaaatctacgtctattacaaccgcc
aaaagattaggtgaatttttgggcgaggaaattgttagggataaaggtttacaatgtaaa
tatattatcagtagtaaaccaataaatgcacctgttaccgaacgtgctattccagtagca
atcttctcatcagatattcaaataaagagaacttatttaaggcgttggctgcaagaccca
acattggagaattttgaccccaggagtattattgattgggattattatagagaaagagtg
gcatctgtagtacaaaaaattattactattccagctgctttacaagatgttactaatcca
gtccctagagttgaacatccagattggttaaaaaagaaaatatccaccaagaccgaaaag
gcaaaacaaagttcattgacgagatttttctctaaatcaaatgataatctcgagcataga
aaagtcaatgatatagaggacatgtttaaagacactaatgatgaattaattgagaagttt
aaggttggtaaagttatgtctagaaagtttggaggcaaaagaaagagaattcaagataaa
aatgaaaacacagcagaagaaaatatggtgttaccagcggaatttcctgcaatcgaggac
aattatgtaggttggttaaaatatcaaaaaattaaatggaaaattcaacaaaaagataga
aaccgaagaaatgaattatttggtaacaataattcttcatctggcagaaatatgctaagt
tctatgattcgaaaacaggctgaatcctatgcaaactcaacttgggagattatacagtat
aagaaaggagaccaacctggtgagcttgaagtgtatgtactaattaaccagaaaattcag
gtgctaaattttaagattccaaaaactctattcataaaattcaaaaatgaagaaatacct
attaataaaattaaaaagtgtaccgtagaaaagtccaatgccatgctaccaaataatcat
tttttaaatgaaggtaagaatggttcattatttaaattaacactgcctgagaagatatat
gaagctgaaagcgaagatccaaccagtattctaaatgatgaaggtgtaatgggtatattt
gaaagtacaattacttcttcagaacgtgctattattgaattaggttctactgtatctttt
tcatccaacgctatgggagcactaggacgaggattacaaaaaggttttgatatgaaaagt
ttatccatgtctgataataatagatatttgtcatctcttccacctggaatttcatacatt
ttgcatctcgttagtgatattggttatgaattttttactgtctataaatcatgggataaa
acagtaagaattttaaccttgaagccctctaaccatgcgcaagttttacaacctgctaca
attgaacaactttataaaactgcatacaataaaaagaaggatgatcattataatcattat
cgttcaattaatctaactaaggacttaaattttgaacagtttagttatactgatattacg
aaggtttataaaaagctgtcacaaatactatctgatataaaggatgaaaaaggtttgcaa
ttcttgatgttaattcaatcaccatatattatgaagttattaaatttcgtcaaatactta
aatcaagttcccttaatcgagttagcttctaacgaattatcattacctcaattaaactgg
caaactattttgagtaaaattatagtttctaatttagtcagcagtggttcatcgttacat
acactgatcacattatctcattatagtaacattcctatttgtaacttgaagttacacgaa
atgaactttattattgacgtactatatgcaagaaagttaaaaaatgaaggtattgtttta
tggtggaatgataaaacacctctgcctgattatggtggtactcaaaaagaatttgatttg
aacacttcctggattatgaatgatctgaaattccttgaaattaacaatccagatgtttat
gataatgttactttggagctatcaattaacaatttgacagtaaatacagttttaacatct
gctgtcatcagtagcattgatggtagtgatttagccgaagttaattcacttatgataaat
aataataatgaaaatggtacaggttcttcgtttgtgcaagattctttttcgactggttca
ttgagtgtactaagatctgttttgaaatcatggtgggatcaagctctgaaaggtgatgtt
agtgcagatctacttgttaattcatttgtttcatgggttcaaaaccctgattctaaacta
ttcgatggtacattaagatatcacgttaataacttgacaaaaaaatctttattgcagcta
atcaatgaattcgtatcattaggttcttcagtagtctatgctgatagaaataaactattt
attaaaacttcgaaaacttccccagaaaattgttatgcttacggtcaatatattgtaaag
gccatccgttcaagttcctctttctgttacttagatctcagtgtcgaacgttattgggat
atactaatatggatggacaaatttaatttcagtggtttagcctgtaacgaaatcaccgat
tccgaaacccaggagatgtctgcctattctcaatggcagataaaggatttcttaccagca
atttatcaacctgaattcgatgactggatcatgattatattagacagcatggtgaagtct
aaagatcaatattacgaaagtaaagctggcacccaaagactaacacaattgcctattgta
aaagatcgaaataatgatgatgacgagactggaccattggagaactacacaaaaatgttt
tatcagacattattacaaagagtccaaaaattattccgtaatcaacaggaatttatttta
gatccgcaatataaaaacgactacatttttccagtagttccgggatctcacttgaacatg
aaaaatccattgctcgaatttgttaaatttatttgtcaagtgatgttgttatcaacaaag
acaaccttagaagttagagaattaagaaaagaactattgaagatatttgaaatacgtgag
tttgagaagaaatctgaatttcaaaatccttcttccagtttggttattaattgtttctta
tgtgaacattgctatcatataacagacatagatatctgtaaagccaacatagaaacagtc
ttttcctgtgaaagatgtgagaaacctttagcaaaacaattatttgaagaccacttaatt
caaatgttggtgagcgactttgaagcatactatacccaagatccacgttgtgtcaaatgc
agacgtgtgaaaaaagatttaatgtcagagcattgtccttgctctggtaattggattaac
acaatctcccaagccgaattgttgcaaaaagtaaagatttataatcaagtcgccaatcat
tacaacttcattagattgacatcggcaatcacagaagtagttcaataa
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integrated database retrieval system
