Tetrapisispora phaffii: TPHA_0C00810
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Entry
TPHA_0C00810 CDS
T02235
Symbol
TPHA0C00810
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TPHA_0C00810 (TPHA0C00810)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0C00810 (TPHA0C00810)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TPHA_0C00810 (TPHA0C00810)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ASA1
DSE1_N
Utp12
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_VPS8
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
WDR54
Beta-prop_RIG_2nd
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_Nup120_160
WD40_like
Beta-prop_ACSF4
WD40_RFWD3
PAC11
Beta-prop_WDR19_2nd
PALB2_WD40
PROPPIN
ELYS-bb
Cas_Csy4
Zn_ribbon_10
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
11533670
NCBI-ProteinID:
XP_003684671
UniProt:
G8BR61
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All DBs
Position
3:complement(158582..161395)
Genome browser
AA seq
937 aa
AA seq
DB search
MVKSYQRFEQDSVFGVITTNANCVWLPSSDSRKSNVGQVLTGALENINLWDIKTGELLSV
LSDGLPPGSIDVKSSKPAEVTYLEYHDETNLLAAGYADGVIKIWDLMSKTVLLSFSGHKS
GVTILKFDSTGTRLMSGSRDSDIIIWDLVSEVGVFKLRSHKDAITGIWCEGEDWLVSTAK
DGLIKLWDLKTQQCVETHIAQTGECWALGVHGDLVVTTGTDSQIKIWNLDTSKENGSKIV
EKGTYEKQSKQRGLSVNFKTTADETTFLYIQNSDKTVEIFRIRKQDEISRALKKREKRMK
EKGSTDEQIQQYFIDTYVSLMLQPFQIIKSTYKIKAVSWTVAANSKIELVVTTSSNTIEY
YSIPYEKRLPKNPSPSKLYTIEQKGHRTDIRSIDISDDNKLLASASNGLLKIWNLKTKSC
IRTFDCGYALTCKFLPSGTLCVIGTREGQIQLFDLVTSTLIESIDVAHNAAIWSLDITQD
GKRLVTGSADKSIKFWNFSIEQDLVPGTTDKFVPVMKLIHDTTLELNDDILSVKISPEDK
YLAVSLLDNTVKVFFLDSMKFFLSLYGHKLPVLSIDISFDSKLIITSSADKNIKIWGLDF
GDCHKSLFAHQDSIMNVCFLPESHNFFSSSKDGLVKYWDGDKFECVQKLAAHQSEVWALA
ITSDGSTVVSSSHDHSMRVWKETDDQVFLEEEREKELEEQYEDTLLTSLEEGSGDSAFKA
DIEDGMDESTSVRNQTMESLKSGERLMEALELGFSEIEALEKYNKDYKQWEKKKAGEPPV
KPQGNAILLAINRRPDQYIMDTLIKIKPSQLEDALLVLPFSYVLQFLKFIDIVMDDPEIL
KNRLALICKNLFIIVKANHKELISQRNDVLKKQITSVKNKLRTSLQANVDDLGFNIQGLK
FIKQQWNLKHNYEFIDEEDQKKQEEKNSKKRIFGTLA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatcgtatcaacgttttgaacaggactctgtgtttggtgttattactacgaat
gcaaattgtgtatggcttccatctagtgacagtagaaagtcaaatgtgggtcaggtttta
actggtgctttggagaatataaatttatgggacattaagaccggtgaattgttatcggtc
ctatccgacggtctaccacctggttcaattgatgtcaaatccagcaaacccgctgaagtt
acatatttagaataccatgatgagacaaatttgttggcggcagggtatgctgatggtgtc
attaaaatttgggatctaatgtccaagacggttcttttgagtttcagtggccataaatct
ggtgtcacaattctgaaattcgattcaactggtacaagattgatgtctggttctagagat
tccgatatcattatctgggatttggtgagtgaagtaggtgtattcaaactacgttcacat
aaggatgccattacaggaatatggtgtgaaggagaggattggttagtcagtaccgctaag
gatggtttgattaaactctgggatttaaagacccaacaatgtgtagagacccacatagcc
caaacaggcgaatgttgggctttgggcgtacatggtgatttggttgtcaccacaggtact
gattcacaaattaaaatttggaatttagatacctcaaaagaaaatggttccaagatagtc
gaaaaaggtacatatgagaagcagagtaagcaaagaggtttatctgtgaattttaaaact
accgctgatgagacaacatttttatacattcaaaactctgataaaactgtagagatattt
agaattagaaaacaagatgaaatatcaagggctctgaaaaagagagaaaaaagaatgaaa
gaaaaaggtagcacagatgaacaaattcaacaatattttattgatacatacgtttctttg
atgttacaaccttttcaaattattaaatcaacatataaaatcaaagctgtttcatggaca
gtggcagctaactcaaaaatagaactcgtagtgactacttcgagtaatactatcgaatat
tattcaattccatatgaaaagagattacctaagaatccatcaccttcaaaactctacacc
attgaacaaaaaggacatagaacagatattcgttccatagatattagtgacgacaataaa
ctattagcatcagcttcgaatggcttgctaaaaatttggaatctaaagactaaatcttgt
ataagaacttttgactgtggttatgctttaacttgtaaatttttgccaagtggcacttta
tgtgtgatcggaacaagagaaggacaaatccagttgtttgatttggtcacatcaacttta
atagagtcgatagatgtcgctcacaacgcagctatttggtctctagatattactcaagat
ggtaaacgattagtcacaggttctgctgataaaagtattaagttttggaatttttcgatc
gaacaagatctagtaccaggaaccaccgataaattcgtcccagtaatgaaattaattcac
gatacaactttagagttgaatgatgacattttaagtgttaaaatttctcctgaagataaa
tatttagcagtatcattattagataatactgttaaggtttttttcttagactcaatgaaa
ttcttcttaagtttatatggtcacaaattaccagtactttcaattgacatatcatttgat
tctaaactaattatcacatcatctgctgataaaaacatcaaaatttggggcttggatttt
ggtgactgtcataaatctttatttgctcatcaagattctattatgaatgtttgcttttta
ccagaatctcataattttttcagttcctctaaagatgggttagtgaaatattgggatggt
gataaatttgaatgtgttcaaaagctagctgctcatcagagtgaagtttgggccttagca
attacatctgatggttctacagtagtttcttcgtctcacgatcactctatgagagtttgg
aaagaaactgatgatcaggtatttttagaagaagaaagggaaaaagaattggaagaacaa
tacgaagatacactattgacttcattggaagaaggctctggtgactcagcttttaaagca
gacattgaagacggaatggatgaatctactagtgttcgtaatcaaaccatggaatcttta
aaatctggtgaaagattaatggaagctttagaattaggtttttcagaaattgaggcctta
gaaaaatataataaagactacaagcaatgggagaaaaagaaagctggtgaacctcctgta
aaacctcaaggaaatgctattttacttgctatcaatagaagaccagatcagtacattatg
gataccttaattaaaataaaaccttcccaattagaagatgccttattagtgttaccattt
tcttatgtcttacaatttttgaaattcattgatatagttatggatgatccagagatattg
aaaaatcgtctagctctaatatgtaaaaacttattcattattgtaaaggcaaaccataaa
gaattaatatcacagagaaacgatgtcctaaaaaagcaaattaccagtgtgaaaaataaa
ttaagaacttctttacaagctaatgtagatgatttaggtttcaatattcaaggtttgaaa
ttcatcaaacagcaatggaatttgaagcacaattatgaattcatagatgaagaagatcaa
aagaaacaggaagaaaaaaattccaagaagaggatttttggaacactagcataa
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