KEGG   Tetrapisispora phaffii: TPHA_0C00810
Entry
TPHA_0C00810      CDS       T02235                                 
Symbol
TPHA0C00810
Name
(RefSeq) hypothetical protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TPHA_0C00810 (TPHA0C00810)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpf03009]
    TPHA_0C00810 (TPHA0C00810)
Ribosome biogenesis [BR:tpf03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TPHA_0C00810 (TPHA0C00810)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ASA1 DSE1_N Utp12 Beta-prop_NOL10_N Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_VPS8 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_Vps41 WDR54 Beta-prop_RIG_2nd Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_Nup120_160 WD40_like Beta-prop_ACSF4 WD40_RFWD3 PAC11 Beta-prop_WDR19_2nd PALB2_WD40 PROPPIN ELYS-bb Cas_Csy4 Zn_ribbon_10 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 11533670
NCBI-ProteinID: XP_003684671
UniProt: G8BR61
LinkDB
Position
3:complement(158582..161395)
AA seq 937 aa
MVKSYQRFEQDSVFGVITTNANCVWLPSSDSRKSNVGQVLTGALENINLWDIKTGELLSV
LSDGLPPGSIDVKSSKPAEVTYLEYHDETNLLAAGYADGVIKIWDLMSKTVLLSFSGHKS
GVTILKFDSTGTRLMSGSRDSDIIIWDLVSEVGVFKLRSHKDAITGIWCEGEDWLVSTAK
DGLIKLWDLKTQQCVETHIAQTGECWALGVHGDLVVTTGTDSQIKIWNLDTSKENGSKIV
EKGTYEKQSKQRGLSVNFKTTADETTFLYIQNSDKTVEIFRIRKQDEISRALKKREKRMK
EKGSTDEQIQQYFIDTYVSLMLQPFQIIKSTYKIKAVSWTVAANSKIELVVTTSSNTIEY
YSIPYEKRLPKNPSPSKLYTIEQKGHRTDIRSIDISDDNKLLASASNGLLKIWNLKTKSC
IRTFDCGYALTCKFLPSGTLCVIGTREGQIQLFDLVTSTLIESIDVAHNAAIWSLDITQD
GKRLVTGSADKSIKFWNFSIEQDLVPGTTDKFVPVMKLIHDTTLELNDDILSVKISPEDK
YLAVSLLDNTVKVFFLDSMKFFLSLYGHKLPVLSIDISFDSKLIITSSADKNIKIWGLDF
GDCHKSLFAHQDSIMNVCFLPESHNFFSSSKDGLVKYWDGDKFECVQKLAAHQSEVWALA
ITSDGSTVVSSSHDHSMRVWKETDDQVFLEEEREKELEEQYEDTLLTSLEEGSGDSAFKA
DIEDGMDESTSVRNQTMESLKSGERLMEALELGFSEIEALEKYNKDYKQWEKKKAGEPPV
KPQGNAILLAINRRPDQYIMDTLIKIKPSQLEDALLVLPFSYVLQFLKFIDIVMDDPEIL
KNRLALICKNLFIIVKANHKELISQRNDVLKKQITSVKNKLRTSLQANVDDLGFNIQGLK
FIKQQWNLKHNYEFIDEEDQKKQEEKNSKKRIFGTLA
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggtaaaatcgtatcaacgttttgaacaggactctgtgtttggtgttattactacgaat
gcaaattgtgtatggcttccatctagtgacagtagaaagtcaaatgtgggtcaggtttta
actggtgctttggagaatataaatttatgggacattaagaccggtgaattgttatcggtc
ctatccgacggtctaccacctggttcaattgatgtcaaatccagcaaacccgctgaagtt
acatatttagaataccatgatgagacaaatttgttggcggcagggtatgctgatggtgtc
attaaaatttgggatctaatgtccaagacggttcttttgagtttcagtggccataaatct
ggtgtcacaattctgaaattcgattcaactggtacaagattgatgtctggttctagagat
tccgatatcattatctgggatttggtgagtgaagtaggtgtattcaaactacgttcacat
aaggatgccattacaggaatatggtgtgaaggagaggattggttagtcagtaccgctaag
gatggtttgattaaactctgggatttaaagacccaacaatgtgtagagacccacatagcc
caaacaggcgaatgttgggctttgggcgtacatggtgatttggttgtcaccacaggtact
gattcacaaattaaaatttggaatttagatacctcaaaagaaaatggttccaagatagtc
gaaaaaggtacatatgagaagcagagtaagcaaagaggtttatctgtgaattttaaaact
accgctgatgagacaacatttttatacattcaaaactctgataaaactgtagagatattt
agaattagaaaacaagatgaaatatcaagggctctgaaaaagagagaaaaaagaatgaaa
gaaaaaggtagcacagatgaacaaattcaacaatattttattgatacatacgtttctttg
atgttacaaccttttcaaattattaaatcaacatataaaatcaaagctgtttcatggaca
gtggcagctaactcaaaaatagaactcgtagtgactacttcgagtaatactatcgaatat
tattcaattccatatgaaaagagattacctaagaatccatcaccttcaaaactctacacc
attgaacaaaaaggacatagaacagatattcgttccatagatattagtgacgacaataaa
ctattagcatcagcttcgaatggcttgctaaaaatttggaatctaaagactaaatcttgt
ataagaacttttgactgtggttatgctttaacttgtaaatttttgccaagtggcacttta
tgtgtgatcggaacaagagaaggacaaatccagttgtttgatttggtcacatcaacttta
atagagtcgatagatgtcgctcacaacgcagctatttggtctctagatattactcaagat
ggtaaacgattagtcacaggttctgctgataaaagtattaagttttggaatttttcgatc
gaacaagatctagtaccaggaaccaccgataaattcgtcccagtaatgaaattaattcac
gatacaactttagagttgaatgatgacattttaagtgttaaaatttctcctgaagataaa
tatttagcagtatcattattagataatactgttaaggtttttttcttagactcaatgaaa
ttcttcttaagtttatatggtcacaaattaccagtactttcaattgacatatcatttgat
tctaaactaattatcacatcatctgctgataaaaacatcaaaatttggggcttggatttt
ggtgactgtcataaatctttatttgctcatcaagattctattatgaatgtttgcttttta
ccagaatctcataattttttcagttcctctaaagatgggttagtgaaatattgggatggt
gataaatttgaatgtgttcaaaagctagctgctcatcagagtgaagtttgggccttagca
attacatctgatggttctacagtagtttcttcgtctcacgatcactctatgagagtttgg
aaagaaactgatgatcaggtatttttagaagaagaaagggaaaaagaattggaagaacaa
tacgaagatacactattgacttcattggaagaaggctctggtgactcagcttttaaagca
gacattgaagacggaatggatgaatctactagtgttcgtaatcaaaccatggaatcttta
aaatctggtgaaagattaatggaagctttagaattaggtttttcagaaattgaggcctta
gaaaaatataataaagactacaagcaatgggagaaaaagaaagctggtgaacctcctgta
aaacctcaaggaaatgctattttacttgctatcaatagaagaccagatcagtacattatg
gataccttaattaaaataaaaccttcccaattagaagatgccttattagtgttaccattt
tcttatgtcttacaatttttgaaattcattgatatagttatggatgatccagagatattg
aaaaatcgtctagctctaatatgtaaaaacttattcattattgtaaaggcaaaccataaa
gaattaatatcacagagaaacgatgtcctaaaaaagcaaattaccagtgtgaaaaataaa
ttaagaacttctttacaagctaatgtagatgatttaggtttcaatattcaaggtttgaaa
ttcatcaaacagcaatggaatttgaagcacaattatgaattcatagatgaagaagatcaa
aagaaacaggaagaaaaaaattccaagaagaggatttttggaacactagcataa

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