Tetrapisispora phaffii: TPHA_0C01050
Help
Entry
TPHA_0C01050 CDS
T02235
Symbol
TPHA0C01050
Name
(RefSeq) hypothetical protein
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpf04131
]
TPHA_0C01050 (TPHA0C01050)
Membrane trafficking [BR:
tpf04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
TPHA_0C01050 (TPHA0C01050)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
zf-RING_16
Beta-prop_EIPR1
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
RWD
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
PAC11
zf-RING_2
zinc_ribbon_16
zf-C3H2C3
Beta-prop_VPS8
C1_2
Motif
Other DBs
NCBI-GeneID:
11534103
NCBI-ProteinID:
XP_003684695
UniProt:
G8BR85
LinkDB
All DBs
Position
3:complement(235500..238874)
Genome browser
AA seq
1124 aa
AA seq
DB search
MTGYVDDNSYSSPTFGQYLSLRVDGGFNAISINPSGRDIVLAGRQGLYIVDLDDPFSQPR
YLQHRTPWQVADVQWSPHPAKPNWVVSTSNQKAIIWNLERNSSNAIEYSLHGHFRAITDI
NFNREHPDILATCSLDTYVHAWDLRSPSRPFYTTSDWISAASQVKWNFKDSNILASSHGN
NVCIWDLRNGSVPLKTLKGHTGGVNSVDFNRNKKTELMTCSNDGYVKFWDYSKQNDPCIK
SVAANFPIWRGRYLPFGDGYCIMPMVGGDNSVYLMKLSSETDDSDNSDQIEPVSILKGHN
DTVLDFIWRSRYHSDSVTDDREFQMVTWSKDNDLRLWPMSNYIYDKVNFVRGKRLEEKLP
NYEYVSYNKEPDSIQEVYIKNKRLLKEHFTSRIKENNDQKHINWIAGVRMNDLGISDSLY
KDRKFQNFGEEVSAIGHKFPKLGFEKISVSTGDLVITLRGPWVEEDPNEYIFIRLIITIP
PEYPSPSKYPKFTIEENSKLTKTKMYELNSMLKEICKKYTNLNFYCLEPCIRFVLGETIN
LDSIEELEAPLLNYAISDHIGQDDISSLTSDSGFSDYFDESEESDQELGDKENLTNRIDK
LNSFQNLNTLDSTPIPNQCGMTWSPDGQLICFFSDHVYSGNNKLVTNKYKTLALAEDNNI
VNDDLNLENDAQRPEAPKRYVDTIVTNTSTTNDKIVTDDESDSADSINSISHDWDNILRN
DSILRTHIPNFESGFYKVFGSPSASEADPGATSKTQNTIIFQDYSHLIPDKRQLALEYRF
IDGTGEEMTMHNASVAGKYGYDAISHCWQILSDYIISQKLNDPYSVSWDSNPLGLKWFIK
ELLTYFEKEKNLQMLALISCIVASQNNSSKVLKSDKSSGEPLPANVESIISFNNNSYENL
SKLDRYSQYSDARGDNPSEFHFRTKRYDNIDNMSIQSDDYFNFRTHSEKLKRKGMWGNDS
SAATLAQSITPTLTTSQKIPEIKVELLNDDILDAIDNRQAPLFDDADVIKMKSYIFQYSK
LLFHWGLTIEHARILKVNIDNKAIPSTKELQYDGFDTCWINDTETKKNCLHNCNFCDLKV
TRNIFICGSCQHLMHTTCAQEWWLMEDECPSGCGCRCPEVFDAT
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgactggttatgttgatgataattcctactcatctcctacgtttggacagtatttatca
ctccgagtagatgggggattcaatgcaatttctataaacccatcaggcagagatattgtt
ttggcaggaagacagggtttatatatcgtggatcttgatgaccctttctcccagcctcgt
tacttacagcatagaacaccgtggcaagtggctgatgttcaatggtctccgcatccagct
aaaccaaattgggtagtatccacgtcaaatcaaaaagcaataatttggaatctagaaaga
aattcttctaacgcaatcgaatattcattacacggacattttagagccataacagatatc
aatttcaatagagagcatcctgatatattagctacctgttctcttgatacatatgttcat
gcttgggatctacgtagtcctagtagaccattttatactaccagtgattggatatcagct
gcatctcaagttaagtggaatttcaaagactcaaatatattagcatcttcccatggaaat
aacgtgtgtatatgggatttgagaaatggatcagttcctctaaagactttaaaaggccat
acgggaggagtgaatagtgttgattttaatcgaaataaaaagacagagttgatgacttgc
tcaaatgacggttatgtcaagttttgggattattcgaaacaaaatgatccttgcattaaa
agtgtcgctgcaaattttcctatatggagaggtaggtacttaccatttggtgatggttat
tgtatcatgccaatggttggtggtgacaattcagtttatttgatgaagctatcttcagaa
acagatgatagcgacaattcggatcaaattgaacctgtatctattcttaagggtcacaat
gatactgttcttgattttatttggagatcaagatatcactcggactcagtcactgatgat
agagaattccaaatggttacctggtcaaaagataacgatctccgattgtggccaatgtca
aattacatatatgataaggttaactttgtgagaggaaaaagattggaagaaaagctccct
aattatgagtatgtttcatataataaagaacctgatagtatacaggaggtttatataaaa
aacaagagattattaaaagagcatttcacctcaagaataaaggaaaacaatgatcaaaaa
catattaattggattgcaggtgtacgtatgaatgatttaggaatatcagattctctttat
aaagatcgcaagtttcaaaattttggtgaggaggtgagtgccattggtcataagtttcca
aaacttggttttgaaaagatctccgtctctaccggtgatttggtcattacattaaggggt
ccttgggtagaagaggatcccaatgagtatatttttataagactaataataaccattcca
cctgaatatccatcaccttcaaagtatccaaaatttactatcgaagaaaatagtaaactg
acaaaaactaaaatgtatgaattaaactctatgctaaaagaaatatgcaaaaagtacact
aacttgaatttttattgtctagaaccgtgtatcagatttgttttaggagaaacaattaat
ttggatagcattgaagaacttgaagcaccacttcttaactatgctatttctgaccatata
ggtcaggacgatatttcttctttaacctcagatagtggtttttcggattattttgacgaa
tctgaagaatcagatcaagagttaggggataaagagaatcttacaaataggattgacaaa
ttgaattcttttcaaaacctaaatacacttgatagcacgcccattcctaatcaatgtggc
atgacatggtcgccggatggacaattgatatgttttttctctgatcatgtatattcagga
aataacaagctggtcacaaataaatataagacattggcattagctgaagataataatata
gtaaatgatgacttaaatctagaaaatgatgcgcaaagaccggaagctccaaagaggtat
gttgatactatagtcacaaatacgagcactactaatgataaaatcgtaactgatgatgag
tcagattctgctgatagtattaatagtatttctcatgattgggataacattttaagaaat
gattcaatattaagaacccacattcctaattttgagagtggtttctataaagtatttggg
tctccttcggcttcagaagcagatccaggggctacatcaaaaactcaaaatactatcatt
tttcaagattacagtcatttaattccagacaagcgtcaattggcattagaatatagattt
atagacggaactggtgaagaaatgacaatgcacaatgcttcggttgcaggcaagtatgga
tacgatgctattagtcattgttggcaaattttatcggattatataatatcacaaaaactg
aatgatccatatagtgtgtcctgggatagtaatccattaggtttgaaatggtttataaaa
gagttattgacttattttgaaaaagaaaaaaacttacagatgttagctttaatttcttgc
atcgtagcatcccaaaacaactcatctaaagttctcaaaagtgataaatctagcggagag
ccgttaccagcaaatgtggaaagtattatttcattcaacaacaattcttatgagaactta
tcaaagttagatagatactctcaatattcagatgcacgcggagacaatccttcagaattt
catttccgaactaaaaggtacgataacattgataacatgtcgattcaaagtgatgattat
tttaattttagaacccactctgaaaaacttaagaggaaaggaatgtggggaaatgactcc
agcgcagctactttagcgcaatccataactcccacgctaaccacatctcagaagattcca
gaaattaaagtagaattactaaatgatgacatcttagatgcgatagacaataggcaggcc
ccgttgtttgatgatgcagatgttattaaaatgaaatcttatattttccaatattccaaa
ttacttttccattggggtttgacaatagaacatgcaagaatacttaaagtgaatattgat
aataaagcaattcctagtactaaagaattgcaatatgatggttttgatacgtgttggata
aatgatactgaaacgaagaaaaattgcttacacaattgtaatttctgtgatttaaaagtg
acaagaaatattttcatatgtggatcctgtcagcatttaatgcacactacctgtgctcaa
gaatggtggctcatggaagatgaatgtccgtccggttgtggatgtagatgtcccgaagtt
tttgatgctacttaa
DBGET
integrated database retrieval system