Tetrapisispora phaffii: TPHA_0C01930
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Entry
TPHA_0C01930 CDS
T02235
Symbol
TPHA0C01930
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03013
Nucleocytoplasmic transport
tpf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TPHA_0C01930 (TPHA0C01930)
03015 mRNA surveillance pathway
TPHA_0C01930 (TPHA0C01930)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0C01930 (TPHA0C01930)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TPHA_0C01930 (TPHA0C01930)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
11533519
NCBI-ProteinID:
XP_003684782
UniProt:
G8BRH2
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All DBs
Position
3:438203..439906
Genome browser
AA seq
567 aa
AA seq
DB search
MKFAFDDLLNSSENDDLLDKVVTSENIQESPLSSPNLDYTYINESEEDESIPHLRLPRKQ
LDNEIMINSLNKVNNMNSFVELRKSEETPSLNPELLQYMKDLDLDSRLPRINVSLHVLVS
NNGNLLVNNNQADGSLETVKKIEIDNSKEKAVLSIQHSFTSRLNALVNSNLEQVKDIKKR
KKEEEQRIRKEREDRERKIEEERRRKKAEEELKRKEEEERLRLEKEALDKQKKELELKEK
ARKEEEALKTQQEKLAELKYNQNVGKEITNFKEINKTFLYYKDKIKEIKRDIIEPVKNGD
KNFKSILSKHKRKINPKFGQLTNSTQQLKNVYEELTKLVDETKTNQLSYNWILNFICKAI
VSQAETEVRVKPASSLALGKLSVLLMIRYEELTELLKARFIKKCPFVIGFSCKIDTEEGR
LRMGWKRKEDNKWEEETTYDERMGGMVTLFSVITRLPVSTEFNGITAESRNPIPISESWR
FLARICNMDKELLTNSHFIILCSWWEAAGKQFVEHYGKQGEKLLRLVAGNLINSVSASKF
IGAARLSILIEEWITTGSIKSFPEMDA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcgtttgatgacttattgaattctagtgagaatgatgatctattagataag
gtggttacgagtgagaatatccaagaatctcctttatcttctcctaatttagattataca
tatatcaatgaaagtgaagaggatgaaagtattccacatcttcgattgccaaggaagcaa
ctagataatgaaatcatgataaacagtttaaacaaggtgaacaatatgaatagctttgtt
gagttacgtaaatctgaagagaccccaagtctcaatcctgaacttcttcaatacatgaag
gatctagacttagattctagattgcccaggataaatgtatcgttacatgtattagtttca
aacaatggcaatctcttagttaataataaccaagcagatggttctttggaaactgtaaag
aagattgagattgacaactcaaaggaaaaagcggttctatcgatacaacattcatttact
tcgagattgaatgcactagtaaatagcaatttagagcaagttaaagatattaagaaacgt
aaaaaagaggaagaacagaggatacgtaaagagagagaagacagagaacgtaagatagaa
gaagaaagaagacgtaaaaaggctgaggaagaactgaaacgcaaagaggaagaagaacga
ttgagactcgaaaaagaagcacttgataaacaaaagaaagaattagagcttaaagaaaaa
gctcgaaaggaggaagaggcattgaagacgcaacaagagaaattggcagaattgaaatac
aatcaaaatgttggcaaagaaattacaaacttcaaagagattaataaaacgttcttatat
tataaagataaaataaaagaaatcaagcgtgatataattgaacctgttaaaaatggtgat
aaaaatttcaagagtatactatcgaagcataagcgtaaaataaatccaaaattcggtcaa
ttgaccaacagcacccagcaattaaaaaatgtttatgaggaactgacaaaactcgttgac
gaaacaaagacaaatcaattatcatataattggatattgaatttcatatgtaaggcaata
gtatctcaagcagaaaccgaggttcgagtcaagccagcatcttcattagcacttgggaag
ttatctgttttattaatgattagatatgaagaattgacagaattattgaaagcaagattt
attaaaaaatgtccatttgttataggtttttcatgtaaaattgatacagaagaaggtagg
ctaaggatgggatggaaacgtaaggaagataataaatgggaagaagagacgacatatgac
gaaagaatgggaggtatggttactttattttctgtaatcactagattacctgtttctact
gaatttaatggaattactgctgaatcgagaaatcctatcccaataagtgaatcgtggaga
ttccttgcaaggatttgtaacatggataaagaattattaacaaactcgcatttcatcatt
ttatgttcgtggtgggaagcagcagggaagcagtttgttgagcattatggaaagcaggga
gaaaagctattgcgattggttgctggaaacctaataaactcagtttctgcttccaaattt
attggtgccgcaagattatcgattctaattgaagaatggatcacaacaggtagcatcaaa
tcattccccgaaatggatgcgtaa
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